Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00236 and RBAM_001570
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00236___rplR.1.9828.seq
# -bsequence dna-align/RBAM_001570___rplR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00236___rplR-RBAM_001570___rplR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00236___rplR-RBAM_001570___rplR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00236___rplR
# 2: RBAM_001570___rplR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity: 322/363 (88.7%)
# Similarity: 322/363 (88.7%)
# Gaps: 0/363 ( 0.0%)
# Score: 1446.0
#
#
#=======================================
BSNT_00236___ 1 ATGATTACGAAAACTAGCAAAAATGCTGCTCGTCTTAAAAGACACGCTCG 50
||||||||||||||||||||||||||||||||||..||||||||.||.||
RBAM_001570__ 1 ATGATTACGAAAACTAGCAAAAATGCTGCTCGTCAAAAAAGACATGCCCG 50
BSNT_00236___ 51 TGTTCGCGCTAAACTTTCCGGTACTGCTGAAAGACCGCGCCTGAACGTTT 100
||||||.|||||||||||.||.||.|||||||||||.||.|||||.||.|
RBAM_001570__ 51 TGTTCGTGCTAAACTTTCAGGCACAGCTGAAAGACCTCGTCTGAATGTGT 100
BSNT_00236___ 101 TCCGTTCTAACAAGCACATTTACGCTCAAATCATCGATGATGTAAATGGT 150
|||||||.|||||.||||||||.||||||||||||||||||||||||||.
RBAM_001570__ 101 TCCGTTCAAACAAACACATTTATGCTCAAATCATCGATGATGTAAATGGC 150
BSNT_00236___ 151 GTAACACTTGCTAGTGCATCTACTCTCGATAAAGACTTGAACGTTGAAAG 200
||.||||||||||||||.|||||||||||||||||.||||||||.|||||
RBAM_001570__ 151 GTTACACTTGCTAGTGCCTCTACTCTCGATAAAGATTTGAACGTGGAAAG 200
BSNT_00236___ 201 CACTGGAGATACTTCTGCTGCTACTAAAGTTGGAGAATTAGTTGCAAAAC 250
||||||.||.|...||||||||.|||||||.||.|||.|.|||||.||||
RBAM_001570__ 201 CACTGGTGACAGCGCTGCTGCTGCTAAAGTCGGTGAACTCGTTGCGAAAC 250
BSNT_00236___ 251 GCGCTGCTGAAAAAGGCATTTCTGACGTAGTATTTGACCGTGGCGGATAC 300
|||||.||||.|||||..||||||||||||||||||||||.|||||||||
RBAM_001570__ 251 GCGCTTCTGAGAAAGGTGTTTCTGACGTAGTATTTGACCGCGGCGGATAC 300
BSNT_00236___ 301 TTATACCATGGACGTGTAAAAGCTTTGGCTGATGCCGCTCGTGAAGCTGG 350
||||||||||||||||||||||||.||||.|||||.|||||||||||.||
RBAM_001570__ 301 TTATACCATGGACGTGTAAAAGCTCTGGCCGATGCAGCTCGTGAAGCCGG 350
BSNT_00236___ 351 ACTTAAATTTTAA 363
|||.|||||||||
RBAM_001570__ 351 ACTGAAATTTTAA 363
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