Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00235 and RBAM_001560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00235___rplF.1.9828.seq
# -bsequence dna-align/RBAM_001560___rplF.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00235___rplF-RBAM_001560___rplF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00235___rplF-RBAM_001560___rplF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00235___rplF
# 2: RBAM_001560___rplF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity: 503/540 (93.1%)
# Similarity: 503/540 (93.1%)
# Gaps: 0/540 ( 0.0%)
# Score: 2367.0
#
#
#=======================================
BSNT_00235___ 1 ATGTCTCGTGTAGGTAAGAAGCTACTTGAGATTCCTTCTGATGTTACAGT 50
|||||||||||||||||.||.||.||||||||.|||||||..||||||||
RBAM_001560__ 1 ATGTCTCGTGTAGGTAAAAAACTGCTTGAGATCCCTTCTGGAGTTACAGT 50
BSNT_00235___ 51 AACGTTAAATGATAACAACACTGTAGCTGTGAAAGGACCAAAAGGAGAAT 100
||||.|.||.||...|||||||||||||||.|||||||||||||||||||
RBAM_001560__ 51 AACGCTGAACGAAGGCAACACTGTAGCTGTAAAAGGACCAAAAGGAGAAT 100
BSNT_00235___ 101 TAACTCGTACGTTTCACCCTGATATGGAGATTAAAGTAGAGGACAATGTG 150
||||||||||.||.||.|||||||||||.||.|||.|.||||||||.|||
RBAM_001560__ 101 TAACTCGTACTTTCCATCCTGATATGGAAATCAAAATTGAGGACAACGTG 150
BSNT_00235___ 151 CTTACAGTCGCTCGTCCTTCTGATCAAAAAGAGCACCGTGCCCTGCATGG 200
||||||||..||||||||||||||||.||||||||||||||.||||||||
RBAM_001560__ 151 CTTACAGTTACTCGTCCTTCTGATCACAAAGAGCACCGTGCGCTGCATGG 200
BSNT_00235___ 201 TACGACTCGCAGTCTGCTTGGCAACATGGTTGAAGGTGTATCTAAAGGAT 250
|||||||||||||||||||||.||||||||||||||.|||||||||||||
RBAM_001560__ 201 TACGACTCGCAGTCTGCTTGGAAACATGGTTGAAGGCGTATCTAAAGGAT 250
BSNT_00235___ 251 TTGAAAGAGGTTTGGAATTAGTCGGTGTCGGTTACCGTGCTTCTAAATCC 300
||||||||||||||||||||||||||||||||||.|||||..||||||||
RBAM_001560__ 251 TTGAAAGAGGTTTGGAATTAGTCGGTGTCGGTTATCGTGCGGCTAAATCC 300
BSNT_00235___ 301 GGAAATAAACTTGTTTTAAACGTTGGATACTCTCATCCTGTTGAGATCGT 350
|||||.|||||||||||||||||||||||||||||.||||||||||||||
RBAM_001560__ 301 GGAAACAAACTTGTTTTAAACGTTGGATACTCTCACCCTGTTGAGATCGT 350
BSNT_00235___ 351 TCCTGAAGAAGGCATCGAAATCGAAGTTCCTTCTCAAACAAAAGTAGTTG 400
|||||||||.|||||||||||||||||||||||||||||.||||||||||
RBAM_001560__ 351 TCCTGAAGAGGGCATCGAAATCGAAGTTCCTTCTCAAACTAAAGTAGTTG 400
BSNT_00235___ 401 TAAAAGGTACAGACAAAGAACGCGTAGGAGCTATTGCTGCTAACATCCGC 450
|||||||||||||||||||.||.|||||||||||.|||||||||||||||
RBAM_001560__ 401 TAAAAGGTACAGACAAAGAGCGTGTAGGAGCTATCGCTGCTAACATCCGC 450
BSNT_00235___ 451 GCTGTACGTTCTCCAGAGCCTTACAAAGGTAAAGGAATCCGCTACGAAGG 500
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001560__ 451 GCTGTACGTTCTCCAGAGCCTTACAAAGGTAAAGGAATCCGCTACGAAGG 500
BSNT_00235___ 501 TGAAGTTGTTCGCCGTAAAGAAGGTAAATCTGCTAAGTAA 540
||||||||||||||||||||||||||||||||||||||||
RBAM_001560__ 501 TGAAGTTGTTCGCCGTAAAGAAGGTAAATCTGCTAAGTAA 540
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