Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00232 and RBAM_001530

See Amino acid alignment / Visit BSNT_00232 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_00232___rplE.1.9828.seq
#    -bsequence dna-align/RBAM_001530___rplE.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00232___rplE-RBAM_001530___rplE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00232___rplE-RBAM_001530___rplE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00232___rplE
# 2: RBAM_001530___rplE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity:     520/540 (96.3%)
# Similarity:   520/540 (96.3%)
# Gaps:           0/540 ( 0.0%)
# Score: 2520.0
# 
#
#=======================================

BSNT_00232___      1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTGCACCTGCTTTAAT     50
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_001530__      1 ATGAACCGCCTTAAAGAAAAGTACAATAAAGAAATTTCACCTGCTTTAAT     50

BSNT_00232___     51 GACTAAGTTCAACTATGATTCAGTCATGCAAGTGCCTAAAATCGAAAAAA    100
                     |||.|||||||||||.||.||.||.|||||.|||||.|||||||||||||
RBAM_001530__     51 GACGAAGTTCAACTACGACTCTGTTATGCAGGTGCCAAAAATCGAAAAAA    100

BSNT_00232___    101 TCGTAATCAACATGGGTGTTGGTGACGCTGTTCAAAACGCCAAAGCAATC    150
                     |||||||||||||||||||.|||||.||||||||||||||.|||||||||
RBAM_001530__    101 TCGTAATCAACATGGGTGTCGGTGATGCTGTTCAAAACGCAAAAGCAATC    150

BSNT_00232___    151 GACAGTGCTGTTGAAGAATTAACGTTTATCGCAGGTCAAAAACCTGTCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001530__    151 GACAGTGCTGTTGAAGAATTAACGTTTATCGCAGGTCAAAAACCTGTCGT    200

BSNT_00232___    201 TACTCGTGCGAAGAAATCAATTGCTGGATTCCGTCTTCGTGAGGGAATGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001530__    201 TACTCGTGCGAAGAAATCAATTGCTGGATTCCGTCTTCGTGAGGGAATGC    250

BSNT_00232___    251 CTATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTATGATTTCCTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001530__    251 CTATCGGTGCGAAAGTAACTCTTCGCGGAGAGCGCATGTATGATTTCCTT    300

BSNT_00232___    301 GATAAACTTATTTCTGTATCTTTACCGCGTGTACGTGACTTCCGCGGGGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
RBAM_001530__    301 GATAAACTTATTTCTGTATCTTTACCGCGTGTACGTGACTTCCGCGGGAT    350

BSNT_00232___    351 TTCTAAAAAATCTTTCGACGGTCGCGGTAACTACACACTTGGTATCAAAG    400
                     ||||||.||||||||||||||||||||.||||||||.||||||||.||||
RBAM_001530__    351 TTCTAAGAAATCTTTCGACGGTCGCGGAAACTACACTCTTGGTATTAAAG    400

BSNT_00232___    401 AACAGTTAATCTTCCCTGAAATTGACTACGATAAAGTAACAAAGGTTCGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001530__    401 AACAGTTAATCTTCCCTGAAATTGACTACGATAAAGTAACAAAGGTTCGC    450

BSNT_00232___    451 GGAATGGACATCGTTATCGTAACAACTGCTAATACTGACGAAGAAGCTCG    500
                     |||||||||||||||||||||||.||||||||..||||||||||.|||||
RBAM_001530__    451 GGAATGGACATCGTTATCGTAACGACTGCTAACTCTGACGAAGAGGCTCG    500

BSNT_00232___    501 TGAGCTATTAACTCAAGTAGGTATGCCGTTCCAGAAATAA    540
                     ||||||||||||||||||||||||||||||||||||||||
RBAM_001530__    501 TGAGCTATTAACTCAAGTAGGTATGCCGTTCCAGAAATAA    540


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