Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00229 and RBAM_001500
See
Amino acid alignment /
Visit
BSNT_00229 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:02
# Commandline: needle
# -asequence dna-align/BSNT_00229___rpsQ.1.9828.seq
# -bsequence dna-align/RBAM_001500___rpsQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00229___rpsQ-RBAM_001500___rpsQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00229___rpsQ-RBAM_001500___rpsQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00229___rpsQ
# 2: RBAM_001500___rpsQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 264
# Identity: 250/264 (94.7%)
# Similarity: 250/264 (94.7%)
# Gaps: 0/264 ( 0.0%)
# Score: 1194.0
#
#
#=======================================
BSNT_00229___ 1 ATGAGCGAACGTAACCAACGCAAAGTTTACCAAGGCCGTGTTGTTTCTGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001500__ 1 ATGAGCGAACGTAACCAACGCAAAGTTTACCAAGGCCGTGTTGTTTCTGA 50
BSNT_00229___ 51 CAAAATGGATAAAACCATTACTGTTGTTGTTGAGACATACAAAAAACATA 100
||||||||||||||||||.||||||||||||||.|||||||||||..||.
RBAM_001500__ 51 CAAAATGGATAAAACCATCACTGTTGTTGTTGAAACATACAAAAAGGATC 100
BSNT_00229___ 101 CACTTTACGGTAAACGCGTAAAATACTCAAAAAAATTCAAAGCACATGAT 150
|..||||||||||||||||||||||||||||.||||||||||||||||||
RBAM_001500__ 101 CTATTTACGGTAAACGCGTAAAATACTCAAAGAAATTCAAAGCACATGAT 150
BSNT_00229___ 151 GAAAATAATCAAGCTAAAATCGGTGACATCGTTAAGATCATGGAAACTCG 200
||||||||.||||||||||||||.||||||||.|||||||||||||||||
RBAM_001500__ 151 GAAAATAACCAAGCTAAAATCGGAGACATCGTAAAGATCATGGAAACTCG 200
BSNT_00229___ 201 TCCATTGTCTGCAACTAAGCGTTTCCGTCTAGTTGAAGTTGTCGAAGAAG 250
||||||.|||||||||||||||||.||||||||.||||||||||||||||
RBAM_001500__ 201 TCCATTATCTGCAACTAAGCGTTTTCGTCTAGTAGAAGTTGTCGAAGAAG 250
BSNT_00229___ 251 CTGTTATTATCTAA 264
||||||||||||||
RBAM_001500__ 251 CTGTTATTATCTAA 264
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.