Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00226 and RBAM_001470

See Amino acid alignment / Visit BSNT_00226 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:02
# Commandline: needle
#    -asequence dna-align/BSNT_00226___rpsC.1.9828.seq
#    -bsequence dna-align/RBAM_001470___rpsC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00226___rpsC-RBAM_001470___rpsC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00226___rpsC-RBAM_001470___rpsC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00226___rpsC
# 2: RBAM_001470___rpsC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity:     631/657 (96.0%)
# Similarity:   631/657 (96.0%)
# Gaps:           0/657 ( 0.0%)
# Score: 3051.0
# 
#
#=======================================

BSNT_00226___      1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001470__      1 GTGGGTCAAAAGGTAAATCCAGTCGGTCTTCGTATCGGAGTCATTCGTGA     50

BSNT_00226___     51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001470__     51 TTGGGAATCTAAGTGGTACGCTGGTAAAGATTACGCTGACTTCCTGCACG    100

BSNT_00226___    101 AAGATTTAAAAATTCGTGAATACATTAGCAAACGCCTTTCTGACGCTTCT    150
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
RBAM_001470__    101 AAGATTTAAAAATTCGTGAATTCATTAGCAAACGCCTTTCTGACGCTTCT    150

BSNT_00226___    151 GTTTCTAAAGTAGAAATCGAGCGTGCAGCAAACCGCGTTAACATTACGAT    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_001470__    151 GTTTCTAAAGTAGAAATCGAGCGCGCAGCAAACCGCGTTAACATTACGAT    200

BSNT_00226___    201 CCACACAGCTAAGCCTGGTATGGTTATCGGTAAAGGCGGTTCTGAAGTCG    250
                     ||||||.|||||||||||||||||.||||||||||||||.||||||||.|
RBAM_001470__    201 CCACACTGCTAAGCCTGGTATGGTAATCGGTAAAGGCGGATCTGAAGTTG    250

BSNT_00226___    251 AAGCACTTCGCAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT    300
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
RBAM_001470__    251 AAGCACTTCGTAAAGCCCTTAACAGCCTTACTGGCAAGCGTGTACACATT    300

BSNT_00226___    301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCACAGCTAGTTGCTGA    350
                     |||||||||||||||||||||||||||||||||||.|||||.||.|||||
RBAM_001470__    301 AACATTCTTGAAATCAAAAGAGCAGATCTTGATGCTCAGCTTGTAGCTGA    350

BSNT_00226___    351 CAACATCGCTCGTCAATTAGAAAACCGTGTTTCTTTCCGCCGTGCGCAGA    400
                     ||||||||||||||||.|||||||||||.|||||||||||||||||||||
RBAM_001470__    351 CAACATCGCTCGTCAACTAGAAAACCGTATTTCTTTCCGCCGTGCGCAGA    400

BSNT_00226___    401 AACAACAAATCCAACGTACTATGCGTGCTGGAGCACAAGGTGTGAAAACA    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
RBAM_001470__    401 AACAACAAATCCAACGCACTATGCGTGCTGGAGCACAAGGTGTGAAAACA    450

BSNT_00226___    451 ATGGTTTCTGGTCGTCTTGGCGGTGCAGATATCGCTCGTTCTGAATACTA    500
                     ||||||||.||.|||||||||||.||.||.||.|||||||||||||||||
RBAM_001470__    451 ATGGTTTCCGGCCGTCTTGGCGGAGCTGACATTGCTCGTTCTGAATACTA    500

BSNT_00226___    501 CAGTGAAGGAACTGTTCCATTGCACACATTACGTGCGGACATTGACTATG    550
                     |||||||||||||||||||||||||||.||||||||.|||||.|||||||
RBAM_001470__    501 CAGTGAAGGAACTGTTCCATTGCACACTTTACGTGCTGACATCGACTATG    550

BSNT_00226___    551 CAACATCTGAAGCTGATACTACTTACGGTAAGCTTGGTGTAAAAGTCTGG    600
                     ||||||||||||||||.||.||||||||||||||||||||||||||||||
RBAM_001470__    551 CAACATCTGAAGCTGACACAACTTACGGTAAGCTTGGTGTAAAAGTCTGG    600

BSNT_00226___    601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAAAAGAGGAAGGAGG    650
                     |||||||||||||||||||||||||||||||||||||..|||||||||||
RBAM_001470__    601 ATCTATCGTGGAGAGGTTCTTCCTACTAAGAAGAAAACTGAGGAAGGAGG    650

BSNT_00226___    651 AAAATAA    657
                     |||||||
RBAM_001470__    651 AAAATAA    657


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