Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00215 and RBAM_001370
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:01
# Commandline: needle
# -asequence dna-align/BSNT_00215___fusA.1.9828.seq
# -bsequence dna-align/RBAM_001370___fusA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00215___fusA-RBAM_001370___fusA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00215___fusA-RBAM_001370___fusA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00215___fusA
# 2: RBAM_001370___fusA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2083
# Identity: 1760/2083 (84.5%)
# Similarity: 1760/2083 (84.5%)
# Gaps: 155/2083 ( 7.4%)
# Score: 8095.5
#
#
#=======================================
BSNT_00215___ 0 -------------------------------------------------- 0
RBAM_001370__ 1 ATGGCAAGAGAGTTCTCCTTAGAAAAAACTCGTAATATCGGGATCATGGC 50
BSNT_00215___ 0 -------------------------------------------------- 0
RBAM_001370__ 51 TCACATCGATGCCGGTAAAACGACTACTACAGAACGGATCTTGTTCTACA 100
BSNT_00215___ 1 -----------------------------------------------ATG 3
|||
RBAM_001370__ 101 CAGGCCGTATCCACAAAATTGGCGAAACTCACGAAGGTGCTTCGCAAATG 150
BSNT_00215___ 4 GACTGGATGGAGCAGGAACAAGAACGTGGTATCACAATCACTTCCGCTGC 53
||||||||||||||||||||||||||.|||||||||||||||||.||.||
RBAM_001370__ 151 GACTGGATGGAGCAGGAACAAGAACGCGGTATCACAATCACTTCTGCAGC 200
BSNT_00215___ 54 GACAACTGCACAGTGGAAAGGATACCGCGTAAACATCATCGATACTCCAG 103
.||.|||||||||||||||||.|||||.|||||||||||||||||.||.|
RBAM_001370__ 201 AACGACTGCACAGTGGAAAGGTTACCGTGTAAACATCATCGATACACCGG 250
BSNT_00215___ 104 GACACGTAGACTTCACAGTTGAAGTTGAACGTTCTCTTCGTGTACTTGAT 153
||||||||||||||||||||||||||||||||||.||.||||||||||||
RBAM_001370__ 251 GACACGTAGACTTCACAGTTGAAGTTGAACGTTCACTCCGTGTACTTGAT 300
BSNT_00215___ 154 GGTGCTGTTGCTGTACTTGACGCGCAATCAGGCGTTGAGCCTCAAACAGA 203
|||||.|||||.||||||||.||.||||||||.|||||||||||.|||||
RBAM_001370__ 301 GGTGCGGTTGCCGTACTTGATGCTCAATCAGGTGTTGAGCCTCAGACAGA 350
BSNT_00215___ 204 AACTGTTTGGCGTCAGGCAACAACTTATGGAGTACCGCGTATCGTTTTTG 253
|||.||.|||||.||.|||||||||||.||||||||||||.|.||.||||
RBAM_001370__ 351 AACAGTATGGCGCCAAGCAACAACTTACGGAGTACCGCGTGTTGTATTTG 400
BSNT_00215___ 254 TTAACAAAATGGACAAAATCGGTGCAGACTTCCTTTACTCTGTAGGAACT 303
|.||||||||||||||||||||.|||||||||||||||||||||||.|||
RBAM_001370__ 401 TCAACAAAATGGACAAAATCGGCGCAGACTTCCTTTACTCTGTAGGCACT 450
BSNT_00215___ 304 TTAAGAGACCGTCTTCAAGCAAACGCTCATGCAATTCAATTGCCGATCGG 353
||||||||||||||||||||.||||||||.||||||||||||||||||||
RBAM_001370__ 451 TTAAGAGACCGTCTTCAAGCTAACGCTCACGCAATTCAATTGCCGATCGG 500
BSNT_00215___ 354 TGCTGAAGATAACTTCGAAGGTATTATTGACCTTGTAGAAAACGTTGCGT 403
|||||||||.||||||||||||||.||.|||.|.||||||||||||||||
RBAM_001370__ 501 TGCTGAAGACAACTTCGAAGGTATCATCGACTTAGTAGAAAACGTTGCGT 550
BSNT_00215___ 404 ATTTCTACGAAGATGACCTCGGAACTCGTTCTGATGCAAAAGAAATCCCT 453
|||||||||||||||||||.|||||||||||.|||||.||||||||||||
RBAM_001370__ 551 ATTTCTACGAAGATGACCTTGGAACTCGTTCAGATGCGAAAGAAATCCCT 600
BSNT_00215___ 454 GAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAACAGCCTTATTGAAGC 503
||||||||||||||||||||||||||||||||||.||||||.||||||||
RBAM_001370__ 601 GAAGAGTACAAAGAGCAAGCTGAAGAGCTTCGCAGCAGCCTGATTGAAGC 650
BSNT_00215___ 504 TGTATGTGAGCTTGATGAAGAGCTTATGGATAAGTACCTTGAGGGTGAAG 553
||||..||||||||||||||||||||||||.|||||||||||.|||||||
RBAM_001370__ 651 TGTAGCTGAGCTTGATGAAGAGCTTATGGAAAAGTACCTTGAAGGTGAAG 700
BSNT_00215___ 554 AAATCACAAT---TG-ACGAGTTAAAAGCAGGAATTCGTAAAGGTACATT 599
|||||||.|| || || |.|||||.|..||.||||||||||||.|
RBAM_001370__ 701 AAATCACTATCCCTGAAC----TGAAAGCTGCTATCCGTAAAGGTACACT 746
BSNT_00215___ 600 AAATGTTGAATTCTACCCTGTTCTTGTTGGTTCTGCCTTCAAAAACAAAG 649
.||||||||||||||||||||.||||||||.|||||.|||||||||||||
RBAM_001370__ 747 GAATGTTGAATTCTACCCTGTACTTGTTGGATCTGCTTTCAAAAACAAAG 796
BSNT_00215___ 650 GTGTTCAACTAGTACTTGATGCTGTTCTTGACTACCTTCCTGCACCAACT 699
|||||||.||.||||||||||||||||||||||||||||||||.||||||
RBAM_001370__ 797 GTGTTCAGCTTGTACTTGATGCTGTTCTTGACTACCTTCCTGCGCCAACT 846
BSNT_00215___ 700 GACGTTGCTGCAATCAAAGGTACACGTCCTGATACAAATGAAGAGATTGA 749
||.||||||||||||||||||..|||||||||||||.||||||||||.|.
RBAM_001370__ 847 GATGTTGCTGCAATCAAAGGTGTACGTCCTGATACAGATGAAGAGATCGT 896
BSNT_00215___ 750 GCGTCATTCTTCTGACGAAGAGCCATTCTCTGCATTAGCATTTAAAGTTA 799
.||||||||||||||.||||||||||||||||||.|.|||||||||||||
RBAM_001370__ 897 TCGTCATTCTTCTGATGAAGAGCCATTCTCTGCACTTGCATTTAAAGTTA 946
BSNT_00215___ 800 TGACTGACCCTTACGTTGGTAAGTTGACGTTCTTCCGTGTGTACTCTGGA 849
|||||||||||||.||.||||||.||||.||||||||.||.||.||.||.
RBAM_001370__ 947 TGACTGACCCTTATGTCGGTAAGCTGACATTCTTCCGCGTATATTCCGGT 996
BSNT_00215___ 850 ACACTTGATTCTGGTTCATACGTGAAAAACTCTACTAAAGGCAAACGTGA 899
|||||||||||.||||||||.||.||.||||||||.||||||||.|||||
RBAM_001370__ 997 ACACTTGATTCCGGTTCATATGTAAAGAACTCTACAAAAGGCAAGCGTGA 1046
BSNT_00215___ 900 GCGTGTTGGACGTATTCTTCAAATGCACGCTAACAGCCGTGAAGAAATCT 949
|||.||.||||||||.|||||||||||||||||||||||||||||.||||
RBAM_001370__ 1047 GCGCGTAGGACGTATCCTTCAAATGCACGCTAACAGCCGTGAAGAGATCT 1096
BSNT_00215___ 950 CTACTGTATACGCAGGGGATATCGCAGCTGCTGTAGGTCTAAAAGATACA 999
|||||||.|||||.||.||.|||||||||||||||||||||||||||||.
RBAM_001370__ 1097 CTACTGTTTACGCTGGAGACATCGCAGCTGCTGTAGGTCTAAAAGATACT 1146
BSNT_00215___ 1000 ACTACTGGAGATACTCTATGTGATGAGAAGGATCTTGTTATCCTTGAGTC 1049
.|||||||||||||||||||||||||||||||||||||.||||||||.||
RBAM_001370__ 1147 TCTACTGGAGATACTCTATGTGATGAGAAGGATCTTGTAATCCTTGAATC 1196
BSNT_00215___ 1050 AATGGAATTCCCAGAACCAGTTATCGACGTTGCTATTGAGCCTAAATCAA 1099
|||||||||||||||.||.|||||||||||.||.||||||||||||||||
RBAM_001370__ 1197 AATGGAATTCCCAGAGCCTGTTATCGACGTAGCGATTGAGCCTAAATCAA 1246
BSNT_00215___ 1100 AAGCTGACCAAGATAAAATGGGTATCGCTTTAGCGAAACTTGCTGAAGAA 1149
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001370__ 1247 AAGCTGACCAAGATAAAATGGGTATCGCTTTAGCGAAACTTGCTGAAGAA 1296
BSNT_00215___ 1150 GATCCTACATTCCGTACTCAAACAAACCCAGAAACTGGCCAAACGATCAT 1199
|||||||||||||||||.|||||||||||.|||||.||.|||||.|||||
RBAM_001370__ 1297 GATCCTACATTCCGTACACAAACAAACCCTGAAACGGGTCAAACAATCAT 1346
BSNT_00215___ 1200 CTCTGGTATGGGTGAACTTCACCTTGATATCATTGTTGACCGTATGAAAC 1249
|||||||||||||||.|||||||||||||||||||||||.||||||||.|
RBAM_001370__ 1347 CTCTGGTATGGGTGAGCTTCACCTTGATATCATTGTTGATCGTATGAAGC 1396
BSNT_00215___ 1250 GCGAATTTAAAGTAGAAGCCAACGTTGGTGCTCCTCAAGTTGCGTACCGT 1299
|.||.||.|||||.|||||.||||||||||||||||||||||||||||||
RBAM_001370__ 1397 GTGAGTTCAAAGTTGAAGCTAACGTTGGTGCTCCTCAAGTTGCGTACCGT 1446
BSNT_00215___ 1300 GAAACATTCCGTACCGGTGCAAAAGTTGAAGGTAAATTCGTACGTCAGTC 1349
||.||||||||||||||||||||||||||||||||||||||||||||.||
RBAM_001370__ 1447 GAGACATTCCGTACCGGTGCAAAAGTTGAAGGTAAATTCGTACGTCAATC 1496
BSNT_00215___ 1350 TGGTGGACGCGGTCAGTTCGGACACGTTTGGATCGAATTCGAACCAAACG 1399
.||.||.||||||||||||||.|||||||||||||||||.|||||.||||
RBAM_001370__ 1497 AGGCGGGCGCGGTCAGTTCGGTCACGTTTGGATCGAATTTGAACCGAACG 1546
BSNT_00215___ 1400 AAGAAGGCGCTGGCTTTGAATTTGAAAATGCGATTGTCGGTGGGGTCGTT 1449
||||||||||||||||||||||.|||||.||.||.||||||||.||.|||
RBAM_001370__ 1547 AAGAAGGCGCTGGCTTTGAATTCGAAAACGCAATCGTCGGTGGTGTTGTT 1596
BSNT_00215___ 1450 CCTCGTGAATATATCCCAGCTGTTCAAGCAGGTCTGGAAGAGGCACTTGA 1499
|||||||||||.||||||||.||.|||||||||||.|||||..|.|||||
RBAM_001370__ 1597 CCTCGTGAATACATCCCAGCCGTACAAGCAGGTCTTGAAGACTCTCTTGA 1646
BSNT_00215___ 1500 AAATGGTGTACTAGCAGGCTTCCCGCTTATTGACATTAAAGCTAAACTTT 1549
|||||||||.|||||.||.||||||||.||.|||||.||.||.|||||||
RBAM_001370__ 1647 AAATGGTGTCCTAGCCGGATTCCCGCTAATCGACATCAAGGCGAAACTTT 1696
BSNT_00215___ 1550 TCGACGGTTCTTACCATGATGTTGACTCAAACGAAATGGCATTTAAAGTT 1599
|.||.||.||||||||||||||||||||||||||||||||.||||||||.
RBAM_001370__ 1697 TTGATGGATCTTACCATGATGTTGACTCAAACGAAATGGCGTTTAAAGTC 1746
BSNT_00215___ 1600 GCTGCTTCTATGGCATTGAAAAATGCAGTCAGCAAATGTAACCCAGTTCT 1649
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001370__ 1747 GCTGCTTCTATGGCATTGAAAAATGCAGTCAGCAAATGTAACCCAGTTCT 1796
BSNT_00215___ 1650 TCTTGAACCAATCATGAAAGTGGAAGTGGTTATTCCAGAAGAATACATGG 1699
|||||||||||||||||||||.|||||.||||||||.|||||||||||||
RBAM_001370__ 1797 TCTTGAACCAATCATGAAAGTTGAAGTTGTTATTCCTGAAGAATACATGG 1846
BSNT_00215___ 1700 GAGATATCATGGGTGATATCACTTCACGTCGCGGACGCGTAGAAGGTATG 1749
||||.||||||||||||.|.|||||.|||||||||||.||||||||||||
RBAM_001370__ 1847 GAGACATCATGGGTGATGTTACTTCTCGTCGCGGACGTGTAGAAGGTATG 1896
BSNT_00215___ 1750 GAAGCACGCGGTAACGCTCAAGTTGTTCGCGCTATGGTTCCTCTTGCTGA 1799
|||||.||||||||||||||||||||.||.||.|||||.|||||||||||
RBAM_001370__ 1897 GAAGCTCGCGGTAACGCTCAAGTTGTGCGTGCGATGGTACCTCTTGCTGA 1946
BSNT_00215___ 1800 AATGTTCGGTTACGCTACTGCACTTCGTTCTAATACCCAAGGTCGCGGTA 1849
|||||||||||||||||||||.|||||||||||.||.|||||.|||||||
RBAM_001370__ 1947 AATGTTCGGTTACGCTACTGCCCTTCGTTCTAACACGCAAGGACGCGGTA 1996
BSNT_00215___ 1850 CGTTCACTATGCACATGGATCACTACGAAGAAGTGCCGAAGAGCGTCGCA 1899
|||||||.|||..|||||||||||||||||||||||||||||||.||||.
RBAM_001370__ 1997 CGTTCACAATGTTCATGGATCACTACGAAGAAGTGCCGAAGAGCATCGCT 2046
BSNT_00215___ 1900 GAAGAAATTATCAAAAAAAATAAAGGCGAATAA 1932
|||||||||||||||||||||||||||||||||
RBAM_001370__ 2047 GAAGAAATTATCAAAAAAAATAAAGGCGAATAA 2079
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