Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00213 and RBAM_001350

See Amino acid alignment / Visit BSNT_00213 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:00
# Commandline: needle
#    -asequence dna-align/BSNT_00213___rpsL.1.9828.seq
#    -bsequence dna-align/RBAM_001350___rpsL.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00213___rpsL-RBAM_001350___rpsL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00213___rpsL-RBAM_001350___rpsL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00213___rpsL
# 2: RBAM_001350___rpsL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 417
# Identity:     398/417 (95.4%)
# Similarity:   398/417 (95.4%)
# Gaps:           0/417 ( 0.0%)
# Score: 1914.0
# 
#
#=======================================

BSNT_00213___      1 ATGCCTACAATTAATCAGCTAATTCGCAAAGGACGCGTGAGTAAAGTAGA     50
                     |||||||||||||||||||||||||||||.|||||||||||.|||||.||
RBAM_001350__      1 ATGCCTACAATTAATCAGCTAATTCGCAAGGGACGCGTGAGCAAAGTTGA     50

BSNT_00213___     51 AAACTCAAAGTCTCCTGCACTTAACAAAGGATACAACAGCTTTAAAAAAG    100
                     ||||||.|||||.||||||||.||||||||||||||||||||||||||||
RBAM_001350__     51 AAACTCTAAGTCACCTGCACTAAACAAAGGATACAACAGCTTTAAAAAAG    100

BSNT_00213___    101 AGCACACTAACGTATCTTCTCCACAAAAACGCGGGGTATGTACTCGTGTT    150
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
RBAM_001350__    101 AGCACACTAACGTATCTTCTCCACAAAAACGCGGGGTATGTACTCGTGTG    150

BSNT_00213___    151 GGTACAATGACACCGAAAAAACCGAACTCAGCACTTCGTAAATATGCTCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_001350__    151 GGTACAATGACACCGAAAAAACCGAACTCAGCACTTCGTAAATATGCTCG    200

BSNT_00213___    201 TGTTCGTTTGACTAACGGAATCGAGGTTACTGCTTACATTCCTGGTATCG    250
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
RBAM_001350__    201 TGTTCGTTTGACTAACGGAATCGAGGTTACTGCCTACATTCCTGGTATCG    250

BSNT_00213___    251 GTCACAACCTGCAAGAGCACAGTGTTGTACTTATCCGCGGCGGACGTGTA    300
                     ||||||||||||||||||||||.||||||||.||||||||||||||||||
RBAM_001350__    251 GTCACAACCTGCAAGAGCACAGCGTTGTACTGATCCGCGGCGGACGTGTA    300

BSNT_00213___    301 AAAGACTTACCAGGGGTACGTTACCACATCGTTCGTGGTGCGCTTGATAC    350
                     |||||||||||.||||||||.|||||||||||||||||.|||||||||||
RBAM_001350__    301 AAAGACTTACCGGGGGTACGCTACCACATCGTTCGTGGCGCGCTTGATAC    350

BSNT_00213___    351 TGCTGGAGTTGAAAACCGTGCACAAGGCCGTTCTAAATACGGTACGAAAA    400
                     |||.|||||||||||||||||.|||||||||||||||||||||||||||.
RBAM_001350__    351 TGCCGGAGTTGAAAACCGTGCGCAAGGCCGTTCTAAATACGGTACGAAAC    400

BSNT_00213___    401 AACCTAAAGCAAAATAA    417
                     ..|||||||||||.|||
RBAM_001350__    401 GTCCTAAAGCAAAGTAA    417


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