Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00207 and RBAM_001310

See Amino acid alignment / Visit BSNT_00207 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_00207___ybxB.1.9828.seq
#    -bsequence dna-align/RBAM_001310___ybxB.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00207___ybxB-RBAM_001310___ybxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00207___ybxB-RBAM_001310___ybxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00207___ybxB
# 2: RBAM_001310___ybxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity:     511/606 (84.3%)
# Similarity:   511/606 (84.3%)
# Gaps:           0/606 ( 0.0%)
# Score: 2175.0
# 
#
#=======================================

BSNT_00207___      1 ATGAGTGAGCACTATTATTCAGAAAAACCTTCAGTGAAAAGCAACAAGCA     50
                     ||||||||.||||||||||||||||||||||||||.||||||.|.||.||
RBAM_001310__      1 ATGAGTGATCACTATTATTCAGAAAAACCTTCAGTTAAAAGCGATAAACA     50

BSNT_00207___     51 AACCTGGTCTTTTAGGCTTCGGAATAAAGATTTCACGTTTACCAGCGACA    100
                     .||.|||||.||||..||.|||||.|.|..||..||.||.||.||.||||
RBAM_001310__     51 GACATGGTCATTTACACTGCGGAACAGATCTTATACATTCACAAGTGACA    100

BSNT_00207___    101 GCGGGGTTTTTTCTAAAAAAGAAGTTGATTTCGGCTCCCGCCTGCTGATT    150
                     ||||.|||||.||.|||||.||||||||||||||.||.||..|..|.|||
RBAM_001310__    101 GCGGCGTTTTCTCGAAAAAGGAAGTTGATTTCGGTTCGCGTGTCTTAATT    150

BSNT_00207___    151 GATTCTTTTGAAGAGCCTGAGGTTGAGGGCAGCTTTTTGGATGTAGGCTG    200
                     ||..|.|||||||||||.|||.|.||.||...|||..||||||.||||||
RBAM_001310__    151 GAAGCGTTTGAAGAGCCGGAGATCGATGGTGACTTCCTGGATGCAGGCTG    200

BSNT_00207___    201 CGGGTACGGCCCGATTGGTTTATCGCTGGCCAGCGACTTTAAAGACCGGA    250
                     |||.|||||||||||.|||.|.||.||.|||.|.||.||||.||||||||
RBAM_001310__    201 CGGTTACGGCCCGATCGGTCTGTCACTCGCCGGTGAATTTACAGACCGGA    250

BSNT_00207___    251 CTATCCACATGATTGACGTTAATGAGAGAGCCGTAGAACTATCAAATGAA    300
                     |..|.||||||||||||||.|||||.|||||||||||.||.|||||||||
RBAM_001310__    251 CCGTGCACATGATTGACGTGAATGAAAGAGCCGTAGAGCTGTCAAATGAA    300

BSNT_00207___    301 AATGCGGAACAAAACGGAATAACAAATGTTAAGATTTATCAAAGCGATTT    350
                     |||||.|||.||||||||||||.|||.|||...||||||||.||.|||||
RBAM_001310__    301 AATGCAGAAAAAAACGGAATAAAAAACGTTCGAATTTATCAGAGTGATTT    350

BSNT_00207___    351 GTTTTCAAACATTGATTCTGCTCAAACATTTGCTTCTATTCTTACAAATC    400
                     .||||||||.||||||||||||||||||||||||||||||.|||||||.|
RBAM_001310__    351 ATTTTCAAATATTGATTCTGCTCAAACATTTGCTTCTATTATTACAAACC    400

BSNT_00207___    401 CCCCAATCCGAGCCGGAAAAAAAGTTGTCCATGCTATCTTTGAGAAAAGC    450
                     ||||||||||.|||||||||||||||||||||||.||.|||||.||||||
RBAM_001310__    401 CCCCAATCCGCGCCGGAAAAAAAGTTGTCCATGCCATTTTTGAAAAAAGC    450

BSNT_00207___    451 GCTGAACACTTAAAAGCTTCAGGTGAATTGTGGATCGTCATACAGAAAAA    500
                     |||||.||.||||..|||||||||||||||||||||||.|||||||||||
RBAM_001310__    451 GCTGAGCATTTAAGGGCTTCAGGTGAATTGTGGATCGTTATACAGAAAAA    500

BSNT_00207___    501 GCAGGGCGCGCCTTCTGCCATTGAAAAGCTCGAGGAACTGTTCGATGAGG    550
                     .|||||||.||||||||||||||||||.||..||||.||.||.||.||.|
RBAM_001310__    501 ACAGGGCGGGCCTTCTGCCATTGAAAAACTGAAGGAGCTTTTTGACGAAG    550

BSNT_00207___    551 TTTCTGTCGTTCAAAAAAAGAAAGGCTATTATATCATAAAAGCAAAAAAA    600
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
RBAM_001310__    551 TTTCTGTGGTTCAAAAAAAGAAAGGCTATTATATCATAAAAGCAAAAAAA    600

BSNT_00207___    601 GTTTGA    606
                     ||||||
RBAM_001310__    601 GTTTGA    606


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