Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00198 and RBAM_001240

See Amino acid alignment / Visit BSNT_00198 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence dna-align/BSNT_00198___rpmG.1.9828.seq
#    -bsequence dna-align/RBAM_001240___rpmG.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00198___rpmG-RBAM_001240___rpmG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00198___rpmG-RBAM_001240___rpmG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00198___rpmG
# 2: RBAM_001240___rpmG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 150
# Identity:     139/150 (92.7%)
# Similarity:   139/150 (92.7%)
# Gaps:           0/150 ( 0.0%)
# Score: 651.0
# 
#
#=======================================

BSNT_00198___      1 ATGAGAAAAAAGATTACGTTAGCATGCAAGACATGCGGAAACCGTAATTA     50
                     ||||||||||||||||||.|.||||||||.|||||||||||.||||||||
RBAM_001240__      1 ATGAGAAAAAAGATTACGCTGGCATGCAAAACATGCGGAAATCGTAATTA     50

BSNT_00198___     51 TACGACAATGAAGAGCTCTGCATCAGCGGCTGAGCGATTAGAAGTAAAGA    100
                     ||||||||||||.|||||||||||||||||||||||.||||||||.||||
RBAM_001240__     51 TACGACAATGAAAAGCTCTGCATCAGCGGCTGAGCGGTTAGAAGTTAAGA    100

BSNT_00198___    101 AATACTGCAGTACTTGCAATTCACATACAGCTCATCTTGAAACAAAATAG    150
                     |.||||||||.||||||||||||||||||||||||.|.||||||||||||
RBAM_001240__    101 AGTACTGCAGCACTTGCAATTCACATACAGCTCATTTAGAAACAAAATAG    150


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