Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00192 and RBAM_001180
See
Amino acid alignment /
Visit
BSNT_00192 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00192___cysE.1.9828.seq
# -bsequence dna-align/RBAM_001180___cysE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00192___cysE-RBAM_001180___cysE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00192___cysE-RBAM_001180___cysE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00192___cysE
# 2: RBAM_001180___cysE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 657
# Identity: 538/657 (81.9%)
# Similarity: 538/657 (81.9%)
# Gaps: 6/657 ( 0.9%)
# Score: 2178.0
#
#
#=======================================
BSNT_00192___ 1 GTGTTTTTTAGAATGCTCAAAGAAGACATTGATACTGTGTTCGATCAAGA 50
||||||||||.||||||.|||||||||||.|||||.||||||||||||||
RBAM_001180__ 1 GTGTTTTTTAAAATGCTAAAAGAAGACATAGATACAGTGTTCGATCAAGA 50
BSNT_00192___ 51 TCCCGCAGCAAGAAGCTATTTTGAAGTGATTTTAACTTATTCCGGTTTAC 100
|||.|||||||||||||||||.|||||..|||||||||||||.|||||||
RBAM_001180__ 51 TCCGGCAGCAAGAAGCTATTTCGAAGTTGTTTTAACTTATTCTGGTTTAC 100
BSNT_00192___ 101 ATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTT 150
|||||||||||||||||||||||||||||||||||||||||||.|.||||
RBAM_001180__ 101 ATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGGAGATTT 150
BSNT_00192___ 151 TATTTCCTTGCACGCTTTATATCTCAAGTAAGCCGATTTTTTACCGGGAT 200
|..|||||.||.|||.|.|||||.||..|...|||.||.||||||||.||
RBAM_001180__ 151 TTCTTCCTGGCGCGCCTGATATCACAGATTGCCCGTTTCTTTACCGGAAT 200
BSNT_00192___ 201 AGAAATCCACCCCGGCGCTACAATCGGGAGAAGATTTTTCATAGACCACG 250
.|||||.||.||||||||.||.|||||||||||.||||||||.|||||||
RBAM_001180__ 201 TGAAATTCATCCCGGCGCGACCATCGGGAGAAGGTTTTTCATTGACCACG 250
BSNT_00192___ 251 GCATGGGGGTTGTCATTGGGGAGACATGTGAAATCGGCAATAACGTAACC 300
|.||||||||.|||||.|||||.|||||||||||||||||||||||.||.
RBAM_001180__ 251 GTATGGGGGTCGTCATAGGGGAAACATGTGAAATCGGCAATAACGTGACG 300
BSNT_00192___ 301 GTTTTTCAGGGGGTTACCCTCGGGGGAACGGGGAAAGAAAAGGGAAAAAG 350
||.||.||.||.||.||.||||||||||||||.|||||||||||.||..|
RBAM_001180__ 301 GTATTCCAAGGTGTCACTCTCGGGGGAACGGGAAAAGAAAAGGGGAAGCG 350
BSNT_00192___ 351 GCACCCAACGATTAAAGATGACGCATTGATAGCCACAGGCGCTAAAGTGC 400
|||.||.||.||.||||||||.||.||.||.||.||.||.||.||.||||
RBAM_001180__ 351 GCATCCGACCATAAAAGATGATGCTTTAATTGCAACCGGAGCGAAGGTGC 400
BSNT_00192___ 401 TCGGTTCTATTACGGTCGGTGAAGGCTC-AAAGATTGGCGCTGGTTCAGT 449
||||.||||||||||||||..|.||.|| |||| |.||.||.||.||.||
RBAM_001180__ 401 TCGGCTCTATTACGGTCGGGCAGGGTTCTAAAG-TAGGGGCCGGCTCCGT 449
BSNT_00192___ 450 AGTGCTGCATGATGTTCCTGATTTTTCAACAGTTGTCGGTATCCCTGGAC 499
.|||||.|.|||||||||.||.|||||.||.||||||||.||.||.||..
RBAM_001180__ 450 TGTGCTTCGTGATGTTCCCGACTTTTCGACCGTTGTCGGCATACCGGGGA 499
BSNT_00192___ 500 GGGTAGTTGTACAAAATGGCAAG-AAAGTAAGACGCGATTTAAACCATCA 548
..||.||..|.||.||.|| ||| |||.|.|.|||||||.|.||.||.||
RBAM_001180__ 500 AAGTCGTCATTCAGAACGG-AAGAAAAATCAAACGCGATCTCAATCACCA 548
BSNT_00192___ 549 GGATTTGCCCGATCCAGTTGCTGACCGCTTTA-AGTCTTTGGAACAGCAG 597
.||.|||||||||||.|||||||||||.|||| || |.|||||.||||||
RBAM_001180__ 549 AGACTTGCCCGATCCGGTTGCTGACCGGTTTAGAG-CATTGGAGCAGCAG 597
BSNT_00192___ 598 ATTTTAGAGCTGAAGGCAGAACTTGAAGACAGAAAAGAAAGGATCAATCA 647
|||||.||.|||.||||.|||||.|||||.|.|||||||||||||||.||
RBAM_001180__ 598 ATTTTTGAACTGCAGGCTGAACTGGAAGATAAAAAAGAAAGGATCAACCA 647
BSNT_00192___ 648 AAAATGA 654
|||||||
RBAM_001180__ 648 AAAATGA 654
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.