Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00187 and RBAM_001170
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00187___gltX.1.9828.seq
# -bsequence dna-align/RBAM_001170___gltX.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00187___gltX-RBAM_001170___gltX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00187___gltX-RBAM_001170___gltX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00187___gltX
# 2: RBAM_001170___gltX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1453
# Identity: 1235/1453 (85.0%)
# Similarity: 1235/1453 (85.0%)
# Gaps: 2/1453 ( 0.1%)
# Score: 5291.0
#
#
#=======================================
BSNT_00187___ 1 ATGGGAAACGAAGTACGCGTCCGTTATGCACCGAGTCCAACCGGACATTT 50
||||||||.|||||||||||.|||||||||||||||||.|||||||||||
RBAM_001170__ 1 ATGGGAAATGAAGTACGCGTTCGTTATGCACCGAGTCCGACCGGACATTT 50
BSNT_00187___ 51 GCATATTGGAAATGCCAGAACGGCGCTTTTTAATTATTTATTTGCCCGCA 100
||||||.||.||.||||||||.|||||||||||.||||||||||||||||
RBAM_001170__ 51 GCATATCGGTAACGCCAGAACAGCGCTTTTTAACTATTTATTTGCCCGCA 100
BSNT_00187___ 101 ATCAAGGCGGTAAGTTTATCATTCGAGTTGAGGATACAGATAAAAAGCGC 150
..||||||||.||||||||.||.||..||||||||||.||.||||||||.
RBAM_001170__ 101 GCCAAGGCGGAAAGTTTATTATCCGGATTGAGGATACGGACAAAAAGCGA 150
BSNT_00187___ 151 AATATTGAGGGCGGAGAACAAAGCCAGCTGAATTATCTGAAGTGGCTAGG 200
||||||||.||||||||.|||||||||||.||.|||.||||.|||||.||
RBAM_001170__ 151 AATATTGAAGGCGGAGAGCAAAGCCAGCTCAACTATTTGAAATGGCTCGG 200
BSNT_00187___ 201 TATTGACTGGGATGAGAGTGTGGATGTCGGAGGAGAGTACGGCCCATACC 250
.||.|||||||||||.|||||||||.||||.|||||.||||||||.||||
RBAM_001170__ 201 CATGGACTGGGATGAAAGTGTGGATATCGGCGGAGAATACGGCCCGTACC 250
BSNT_00187___ 251 GTCAGTCAGAGCGTAACGATATCTATAAAGTGTACTATGAAGAGCTTCTT 300
|.|||||.|||||||||||.||.||.|||..|||||||||||||||||||
RBAM_001170__ 251 GCCAGTCTGAGCGTAACGACATTTACAAAAAGTACTATGAAGAGCTTCTT 300
BSNT_00187___ 301 GAAAAAGGGCTTGCTTATAAATGTTACTGTACGGAAGAAGAGCTTGAAAA 350
|||||||||||||||||||||||||.|||||||||||||||.|||||.||
RBAM_001170__ 301 GAAAAAGGGCTTGCTTATAAATGTTTCTGTACGGAAGAAGAACTTGAGAA 350
BSNT_00187___ 351 AGAGCGTGAAGAACAGATTGCCCGCGGAGAAATGCCTCGTTATTCTGGAA 400
||||||||||||.||.||.||||||||.||||||||.||.|||||.||.|
RBAM_001170__ 351 AGAGCGTGAAGAGCAAATCGCCCGCGGGGAAATGCCGCGCTATTCCGGCA 400
BSNT_00187___ 401 AACACAGAGACCTGACTCAGGAAGAACAGGAGAAATTTATCGCTGAAGGC 450
||||||||.||||||||||||||||.||||||...|||.|.||.||||||
RBAM_001170__ 401 AACACAGAAACCTGACTCAGGAAGAGCAGGAGCGGTTTTTAGCCGAAGGC 450
BSNT_00187___ 451 AGAAAACCAAGTATTCGTTTCCGCGTGCCGGAAGGAAAAATCATCGCCTT 500
|||.|.||.||.||.||||||||||||||||||||.|||||||||||.||
RBAM_001170__ 451 AGACAGCCGAGCATCCGTTTCCGCGTGCCGGAAGGGAAAATCATCGCATT 500
BSNT_00187___ 501 CAATGATATCGTAAAAGGCGAAATTTCTTTTGAATCAGATGGCATCGGCG 550
.||.||||||||||||||.||.|||||||||||||||||.||||||||||
RBAM_001170__ 501 TAACGATATCGTAAAAGGTGAGATTTCTTTTGAATCAGACGGCATCGGCG 550
BSNT_00187___ 551 ACTTTGTTATTGTGAAAAAGGACGGAACGCCGACTTACAACTTCGCGGTA 600
|||||||.||.||.|||||.||||||||.|||||.||.|||||.||.||.
RBAM_001170__ 551 ACTTTGTCATCGTCAAAAAAGACGGAACACCGACGTATAACTTTGCCGTC 600
BSNT_00187___ 601 GCGATTGATGACTACTTAATGAAAATGACACACGTGCTGCGCGGTGAGGA 650
||||||||.||.|||||||||||||||||.||||||||.|||||||||||
RBAM_001170__ 601 GCGATTGACGATTACTTAATGAAAATGACGCACGTGCTCCGCGGTGAGGA 650
BSNT_00187___ 651 TCATATTTCTAACACACCGAAACAGATTATGATTTATCAAGCATTCGGAT 700
|||.|||||.||.||||||||||||||.|||||||..||.||||||||.|
RBAM_001170__ 651 TCACATTTCAAATACACCGAAACAGATCATGATTTTCCAGGCATTCGGCT 700
BSNT_00187___ 701 GGGATATTCCTCAGTTCGGACACATGACGCTGATTGTAAACGAAAGCCGT 750
|||||.|||||...||||||||.||||||||.||.||||||||||||||.
RBAM_001170__ 701 GGGATGTTCCTGTCTTCGGACATATGACGCTTATCGTAAACGAAAGCCGC 750
BSNT_00187___ 751 AAAAAGCTCAGTAAACGTGATGAATCCATTATTCAATTCATCGAGCAGTA 800
|||||..|.|||||||||||||||||.|||||.||.||.||.||||||||
RBAM_001170__ 751 AAAAAATTAAGTAAACGTGATGAATCAATTATCCAGTTTATTGAGCAGTA 800
BSNT_00187___ 801 CAAAGAGCTTGGCTACCTGCCAGAAGCGCTGTTCAACTTTATCGGACTGC 850
..|.|||||.||.||||||||.|||||||||||.||||||||||||||.|
RBAM_001170__ 801 TGATGAGCTGGGTTACCTGCCTGAAGCGCTGTTTAACTTTATCGGACTTC 850
BSNT_00187___ 851 TAGGCTGGTCACCGGTTGGAGAAGAAGAGCTTTTCACAAAAGAGCAGTTT 900
|.||||||||.||.||.||.|||||||||||||||||||.|||.||.||.
RBAM_001170__ 851 TCGGCTGGTCTCCCGTCGGTGAAGAAGAGCTTTTCACAAGAGAACAATTC 900
BSNT_00187___ 901 ATTGAAATTTTTGATGTAAATCGTTTATCTAAATCACCAGCTTTGTTTGA 950
||||||||||||||||||||||||||.|||||.|||||.|||.|||||||
RBAM_001170__ 901 ATTGAAATTTTTGATGTAAATCGTTTGTCTAAGTCACCGGCTCTGTTTGA 950
BSNT_00187___ 951 TATGCATAAGCTAAAATGGGTTAACAACCAATATGTGAAGAAGCTGGATC 1000
|||||||||.||.||||||||.|||||||||||.||.||...||||||||
RBAM_001170__ 951 TATGCATAAACTGAAATGGGTCAACAACCAATACGTCAAAGCGCTGGATC 1000
BSNT_00187___ 1001 TTGATCAGGTTGTTGAACTGACGCTTCCGCATTTGCAAAAAGCGGGCAAA 1050
|||||||.||.|||||.|||||.||.|||||..||||||||||.||.|||
RBAM_001170__ 1001 TTGATCAAGTGGTTGAGCTGACCCTGCCGCACCTGCAAAAAGCAGGAAAA 1050
BSNT_00187___ 1051 GTTGGCACTGAGCTTTCTGCTGAAGAACAAGAGTGGGTTCGTAAACTGAT 1100
||.|||||||||||||||||.||.||.||.||.||||||||||||.|.||
RBAM_001170__ 1051 GTCGGCACTGAGCTTTCTGCCGAGGAGCAGGAATGGGTTCGTAAATTAAT 1100
BSNT_00187___ 1101 TTCCCTGTATCATGAGCAATTAAGCTACGGTGCGGAAATTGTTGAGCTGA 1150
|||.||.||.|||||||||||.||||||||.||.||||||||.|||||||
RBAM_001170__ 1101 TTCTCTTTACCATGAGCAATTGAGCTACGGCGCTGAAATTGTCGAGCTGA 1150
BSNT_00187___ 1151 CTGATTTGTTCTTTACGGATGAGATCGAGTATAATCAAGAAGCGAAAGCT 1200
|||||||||||||||..|||||||||||||||||||||||.||.|||||.
RBAM_001170__ 1151 CTGATTTGTTCTTTAAAGATGAGATCGAGTATAATCAAGAGGCAAAAGCC 1200
BSNT_00187___ 1201 GTTCTGGAAGAAGAACAGGTTCCTGAAGTGCTCAGCACATTCGCAGCGAA 1250
|||||||||||.||||||||.|||||||||||||||...||.||.|||||
RBAM_001170__ 1201 GTTCTGGAAGAGGAACAGGTGCCTGAAGTGCTCAGCGTCTTTGCTGCGAA 1250
BSNT_00187___ 1251 GCTTGAAGAGCTTGAGGAGTTCACTCCGGATAACATCAAAGCATCAATCA 1300
|||||||||||||||.||.||.||.||.||....||||||||.|||||||
RBAM_001170__ 1251 GCTTGAAGAGCTTGAAGAATTTACGCCTGAGCTGATCAAAGCCTCAATCA 1300
BSNT_00187___ 1301 AAGCAGTGCAGAAAGAAACTGGCCATAAAGGGAAAAAACTGTTTATGCCG 1350
||||.||.|||||||||||.|||||||||||.|||||.|||||.||||||
RBAM_001170__ 1301 AAGCTGTTCAGAAAGAAACAGGCCATAAAGGCAAAAAGCTGTTCATGCCG 1350
BSNT_00187___ 1351 ATTCGTGTTGCTGTAACAGGGCAAACTCACGGTCCGGAACTGCCGCAATC 1400
||||||||.||.||.||.||.||.||.||||||||.||.||.|||||..|
RBAM_001170__ 1351 ATTCGTGTAGCGGTTACCGGTCAGACACACGGTCCTGAGCTTCCGCAGGC 1400
BSNT_00187___ 1401 AATTGAATTGATCGGTAAAGAGACTGCAATTCAG-CGTTTAAAAAATATC 1449
.|||||..|||||||.|.|||.||.|| ..|||| ||..|.||||..||.
RBAM_001170__ 1401 CATTGAGCTGATCGGCAGAGAAACAGC-CGTCAGACGCCTGAAAAGCATT 1449
BSNT_00187___ 1450 TAA 1452
|||
RBAM_001170__ 1450 TAA 1452
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