Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00183 and RBAM_001140
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00183___yacL.1.9828.seq
# -bsequence dna-align/RBAM_001140___yacL.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00183___yacL-RBAM_001140___yacL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00183___yacL-RBAM_001140___yacL.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00183___yacL
# 2: RBAM_001140___yacL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 944/1101 (85.7%)
# Similarity: 944/1101 (85.7%)
# Gaps: 0/1101 ( 0.0%)
# Score: 4092.0
#
#
#=======================================
BSNT_00183___ 1 ATGTTAAAACGAATAGTTCAGGCGTTCTTCATTATTTTTGGCGGCGTTGT 50
||||||||||||||||||||||||||||||||||||.|.|||||||||||
RBAM_001140__ 1 ATGTTAAAACGAATAGTTCAGGCGTTCTTCATTATTGTGGGCGGCGTTGT 50
BSNT_00183___ 51 TGGTATATTTTTGATACCTGAATTGTTTGTACTGTTAAATATACAGGACA 100
.|||||.|||||.||||||||||||||||||||||.||||||||||||||
RBAM_001140__ 51 CGGTATCTTTTTAATACCTGAATTGTTTGTACTGTCAAATATACAGGACA 100
BSNT_00183___ 101 TACCTTTAATAACAAACGCATATACGTCTGCGGCAATAGGAGCAATTATC 150
|||||||||||||||||||||||||||||||.|||||.||.||.||||||
RBAM_001140__ 101 TACCTTTAATAACAAACGCATATACGTCTGCTGCAATTGGTGCTATTATC 150
BSNT_00183___ 151 TTTTTTCTCATCAGTATATGGGGTACAGAATACGTTGTGAACTGGGTGAA 200
|||||||||||||||||||||...||||||||.||..|.||.|||||.||
RBAM_001140__ 151 TTTTTTCTCATCAGTATATGGACGACAGAATATGTGATTAATTGGGTAAA 200
BSNT_00183___ 201 GTGGATAGAGGATTCATTGTTAAAAGCGCCGGTTCCAGATTTGTTATTTG 250
.|||||.||.|||||.|||.|.|.|||.|||||.||.|||.|||||||.|
RBAM_001140__ 201 ATGGATTGAAGATTCTTTGCTGAGAGCTCCGGTGCCGGATCTGTTATTCG 250
BSNT_00183___ 251 GAAGTCTTGGCTTAGTTTTTGGACTTATAATTGCTTATCTTATCGTAAAT 300
|.|||||.||.||.||||||||||||||.||.||.|||||.||.|||||.
RBAM_001140__ 251 GGAGTCTCGGATTGGTTTTTGGACTTATCATCGCATATCTCATTGTAAAC 300
BSNT_00183___ 301 GTTATTCCTTTAGACAATATACCTTACCGCATATTCAGCACAATAATTCC 350
||.|||||..|.||||||||.||.|||||.|||||||||||.||.|||||
RBAM_001140__ 301 GTGATTCCGCTGGACAATATTCCGTACCGTATATTCAGCACCATCATTCC 350
BSNT_00183___ 351 TGTATTTTTGGCTTTCTTCCTCGGTTATCTCGGCTTCCAGGTGGGCTTTA 400
.||.|||.||||||||||.||||||||.||.||||||||.||.||.||||
RBAM_001140__ 351 GGTCTTTCTGGCTTTCTTTCTCGGTTACCTGGGCTTCCAAGTCGGATTTA 400
BSNT_00183___ 401 AGAAAAAGGATGAATTGATCAGCCTGTTTTCCATTTCCGCCAGAATGCAA 450
||||||||||||||.|||||||.||.||.||||||||.||.||||||||.
RBAM_001140__ 401 AGAAAAAGGATGAACTGATCAGTCTTTTCTCCATTTCTGCAAGAATGCAG 450
BSNT_00183___ 451 AAGAAAAAAGGAACAGCTGATGAAGAACATGAGGTTCAAGACAAGAAGCT 500
||||||||.||||..||||||||.||.||.||||..||.||.||.|.|||
RBAM_001140__ 451 AAGAAAAAGGGAAGTGCTGATGAGGAGCAGGAGGAACAGGATAAAAGGCT 500
BSNT_00183___ 501 GAAAATTTTGGACACTAGTGTTATTATTGATGGGAGAATAGCAGATATTT 550
||||||.|||||.||.|||||||||||||||||||||||.||||||||||
RBAM_001140__ 501 GAAAATCTTGGATACAAGTGTTATTATTGATGGGAGAATTGCAGATATTT 550
BSNT_00183___ 551 GTCAGACTGGTTTTTTAGAGGGAGTTATCGTGATTCCGCAGTTTGTCCTT 600
|||||||.||.||||||||.||.||.||.||.|||||.||.|||||.||.
RBAM_001140__ 551 GTCAGACGGGCTTTTTAGAAGGCGTCATTGTCATTCCTCAATTTGTGCTG 600
BSNT_00183___ 601 GAGGAATTGCAGCATATTGCAGACTCTTCAGATGTTTTAAAACGAAACAG 650
||||||||.||||||||.||.||.||||||||||||||||||||.|||||
RBAM_001140__ 601 GAGGAATTACAGCATATCGCTGATTCTTCAGATGTTTTAAAACGTAACAG 650
BSNT_00183___ 651 AGGACGCCGCGGTCTTGATATCCTGAACCGCATTCAGAAAGAATTAGACA 700
||||||||||||.||.||||||.||||.||||||||.||.|||.|.||.|
RBAM_001140__ 651 AGGACGCCGCGGACTGGATATCTTGAATCGCATTCAAAAGGAACTGGATA 700
BSNT_00183___ 701 TTGAAGTTGAAATTTACGAAGGCGACTTTGAAGATATTCAGGAGGTTGAC 750
||...|||||||||||.|||||||||||.||.||.|||||||||||||||
RBAM_001140__ 701 TTACGGTTGAAATTTATGAAGGCGACTTCGAGGACATTCAGGAGGTTGAC 750
BSNT_00183___ 751 AGCAAGCTCGTCAAACTTGCTAAGCTGACATCCGGGGTCGTTGTGACGAA 800
||||||||.|||||||||||.||||||||||||||.||||||||||||||
RBAM_001140__ 751 AGCAAGCTTGTCAAACTTGCGAAGCTGACATCCGGCGTCGTTGTGACGAA 800
BSNT_00183___ 801 TGATTTTAATTTAAATAAAGTGTGCGAGCTTCAGAAGGTAGCAGTATTAA 850
|||||||||||||||||||||.||.||||||||||||||.||.|||.|.|
RBAM_001140__ 801 TGATTTTAATTTAAATAAAGTATGTGAGCTTCAGAAGGTTGCGGTACTGA 850
BSNT_00183___ 851 ACATTAATGACCTTGCCAATGCGGTCAAGCCTGTTGTGCTTCCTGGCGAG 900
|.||||||||||||||.||.|||||.|||||.|||||||||||.|||||.
RBAM_001140__ 851 ATATTAATGACCTTGCAAACGCGGTGAAGCCGGTTGTGCTTCCGGGCGAA 900
BSNT_00183___ 901 GAAATGAATGTTCAGGTCATTAAGGACGGGAAAGAGCATAATCAGGGAGT 950
||.||||||||.|||||.||||||||||||||||||||||||||.||.||
RBAM_001140__ 901 GAGATGAATGTGCAGGTGATTAAGGACGGGAAAGAGCATAATCAAGGTGT 950
BSNT_00183___ 951 TGCCTACTTGGATGACGGTACGATGATTGTCGTTGAAGAAGGACGCAATT 1000
.||.||||||||||||||.|||||||||||.||.||||||||.|||||||
RBAM_001140__ 951 GGCTTACTTGGATGACGGGACGATGATTGTTGTGGAAGAAGGCCGCAATT 1000
BSNT_00183___ 1001 ATATCGGCAAGCATATTGATGTACTCGTCACAAGTGTGCTGCAGACAGCA 1050
||||.||.||.|||||||||||.|||||.||.||.||.|||||||||||.
RBAM_001140__ 1001 ATATAGGTAAACATATTGATGTGCTCGTAACCAGCGTACTGCAGACAGCG 1050
BSNT_00183___ 1051 GCGGGACGAATGATTTTTGCGAAGCCTAAGCTGTTGGAGAAGGCGCTGTA 1100
||||||||||||||||||||.|||||.||||||.|.|||||.||.||.||
RBAM_001140__ 1051 GCGGGACGAATGATTTTTGCCAAGCCCAAGCTGCTTGAGAAAGCTCTTTA 1100
BSNT_00183___ 1101 A 1101
|
RBAM_001140__ 1101 A 1101
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