Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00176 and RBAM_001100
See
Amino acid alignment /
Visit
BSNT_00176 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00176___mcsB.1.9828.seq
# -bsequence dna-align/RBAM_001100___mcsB.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00176___mcsB-RBAM_001100___mcsB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00176___mcsB-RBAM_001100___mcsB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00176___mcsB
# 2: RBAM_001100___mcsB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1093
# Identity: 899/1093 (82.3%)
# Similarity: 899/1093 (82.3%)
# Gaps: 2/1093 ( 0.2%)
# Score: 3707.0
#
#
#=======================================
BSNT_00176___ 1 ATGTCGCTAAAGCATTTTATTCAGGACGCACTAAGCAGTTGGATGAAGCA 50
||||||||.||||||||||||||||||||||||||||.||||||||||||
RBAM_001100__ 1 ATGTCGCTCAAGCATTTTATTCAGGACGCACTAAGCAATTGGATGAAGCA 50
BSNT_00176___ 51 GAAAGGACCTGAAAGTGACATTGTACTCAGCAGCCGCATACGTTTAGCAA 100
.||.||||||||||||||||||||||||||||||||.|||||.||.||..
RBAM_001100__ 51 AAAGGGACCTGAAAGTGACATTGTACTCAGCAGCCGTATACGGTTGGCCC 100
BSNT_00176___ 101 GGAACTTTGAGCATATTCGGTTCCCTACGCGGTATTCCAATGAAGAAGCC 150
|.||||||||..||||...|||.||..|.||||||.|.||||||||||||
RBAM_001100__ 101 GAAACTTTGAAAATATAAAGTTTCCCGCCCGGTATACGAATGAAGAAGCC 150
BSNT_00176___ 151 TCATCCATCATACAGCAATTTGAAGATCAGTTTTCAGAGCAAGAAATTCC 200
|||||||||||.||||||||.||||||||.|||||||...|||||.|.||
RBAM_001100__ 151 TCATCCATCATTCAGCAATTCGAAGATCATTTTTCAGGAAAAGAACTGCC 200
BSNT_00176___ 201 CGGAATCGGCAAATTTGTTTTGATTAGAATGAATGATGCACAGCCTTTAG 250
.|..|||||..|||||..|||.||.|||||||.|||.||.||||||||.|
RBAM_001100__ 201 TGATATCGGTCAATTTCATTTAATCAGAATGAGTGAAGCTCAGCCTTTGG 250
BSNT_00176___ 251 AGAAGCGTGTACTTGTTGAAAAACATCTAATCAGTCCGAATCTGACAGAG 300
|.||.||.||.||..|.||.||||||||.|||||.||||||.|.||.||.
RBAM_001100__ 251 AAAAACGGGTGCTGATGGAGAAACATCTGATCAGCCCGAATTTAACGGAA 300
BSNT_00176___ 301 TCTCCTTTTGGCGGCTGTTTGCTTTCTGAAAATGAGGAAGTAAGCGTCAT 350
||.|||||||||||||||.||||||||||||||||.|||||.|||.|.||
RBAM_001100__ 301 TCCCCTTTTGGCGGCTGTCTGCTTTCTGAAAATGAAGAAGTCAGCATTAT 350
BSNT_00176___ 351 GCTAAATGAAGAGGACCATATTAGAATTCAGTGTCTTTTCCCTGGATTTC 400
|.||||||||||.||.|||||.||||||||.||.||.|||||.||.||.|
RBAM_001100__ 351 GTTAAATGAAGAAGATCATATCAGAATTCAATGCCTCTTCCCCGGCTTCC 400
BSNT_00176___ 401 AGCTTTTAGAAGCAATGAAAGCCGCAAACCAGGTCGACGACTGGATCGAA 450
|||||.|..|.||.||.|||||.|||||||||||.||.||||||||.||.
RBAM_001100__ 401 AGCTTCTCAACGCCATAAAAGCGGCAAACCAGGTTGATGACTGGATTGAG 450
BSNT_00176___ 451 GAAAAAGTTGATTATGCATTCAATGAGCAAAGAGGATACTTAACCAGCTG 500
||.|||||.|||||.||.||....|||.|.|||||.||||||||.|||||
RBAM_001100__ 451 GAGAAAGTGGATTACGCCTTTGGAGAGAAGAGAGGGTACTTAACAAGCTG 500
BSNT_00176___ 501 TCCTACAAACGTAGGTACAGGTTTAAGGGCTTCGGTCATGATGCATCTGC 550
|||||||||.|||||.||.||..||||||||||.||||||||||||.|||
RBAM_001100__ 501 TCCTACAAATGTAGGGACGGGACTAAGGGCTTCAGTCATGATGCATTTGC 550
BSNT_00176___ 551 CGGCACTGGTTTTAACTAGGCAAATAAATCGAATTATACCGGCAATTAAT 600
|||..||.||.||||||||||||||.|||||||||||||||||||||||.
RBAM_001100__ 551 CGGGTCTTGTATTAACTAGGCAAATGAATCGAATTATACCGGCAATTAAC 600
BSNT_00176___ 601 CAATTAGGCTTAGTTGTTAGAGGAATTTATGGGGAAGGCAGCGAAGCAGT 650
||||||||.||||||||||||||||||||.||.|||||||||||||||.|
RBAM_001100__ 601 CAATTAGGTTTAGTTGTTAGAGGAATTTACGGTGAAGGCAGCGAAGCATT 650
BSNT_00176___ 651 AGGGAATATCTTTCAAATTTCAAATCAGATCACGCTTGGTAAGTCAGAGC 700
|||.|||||||||||||||||||||||.|||||.||.||.||.|||||.|
RBAM_001100__ 651 AGGAAATATCTTTCAAATTTCAAATCAAATCACACTCGGAAAATCAGAAC 700
BSNT_00176___ 701 AGGATATTGTAGAGGATCTTAACAGTGTTGCTGCTCAGTTGATTGAACAA 750
||||.||||||||.|||.|.||||||||.|||||.|||.|||||||.||.
RBAM_001100__ 701 AGGACATTGTAGATGATTTAAACAGTGTGGCTGCCCAGCTGATTGAGCAG 750
BSNT_00176___ 751 GAACGATCTGCCCGAGAAGCGATTTATCAAACTTCTAAAATCGAACTTGA 800
|||||.||.||||||||||||.||||.|||||.||.|||||.|||.|.||
RBAM_001100__ 751 GAACGTTCAGCCCGAGAAGCGCTTTACCAAACCTCGAAAATTGAATTGGA 800
BSNT_00176___ 801 GGATCGGGTATATC-GGTCTTATGGGGTCTTGTCTAATTGCCGGATGATA 849
|||.||||||| || |.|||||.||.||.||.||.||.|||||.|||||.
RBAM_001100__ 801 GGACCGGGTAT-TCAGATCTTACGGCGTTTTATCCAACTGCCGTATGATT 849
BSNT_00176___ 850 GAATCGAAAGAAACTGCAAAGTGCCTTTCAGATGTTCGGTTAGGCATAGA 899
|||||.||.|||||.||.||.||||||||.||.||||||.|.||.|||||
RBAM_001100__ 850 GAATCAAAGGAAACGGCGAAATGCCTTTCTGACGTTCGGCTGGGGATAGA 899
BSNT_00176___ 900 CCTAGGCATTATAAAAGGACTTTCAAGCAACATACTTAACGAACTTATGA 949
|||.||.||.||.|||||.||.||||||||.||||||||.|||||.||||
RBAM_001100__ 900 CCTGGGGATCATTAAAGGGCTATCAAGCAATATACTTAATGAACTGATGA 949
BSNT_00176___ 950 TTTTGACGCAGCCAGGATTTTTACAGCAATACTCGGGAGGCGCTTTGCGT 999
|||||||.|||||.||.|||.|.||||||||.|||||.||.||.||.||.
RBAM_001100__ 950 TTTTGACACAGCCGGGTTTTCTCCAGCAATATTCGGGCGGTGCATTACGG 999
BSNT_00176___ 1000 CCGAACGAAAGGGACATTCGAAGAGCGGCTCTCATCAGAGAACGGCTTCA 1049
|||||||||||.|||....|||||||||||||.|||||.|||.||||.||
RBAM_001100__ 1000 CCGAACGAAAGAGACGCGAGAAGAGCGGCTCTTATCAGGGAAAGGCTGCA 1049
BSNT_00176___ 1050 CTTAGAAATGAATGGGAAAAGACAGGAGGATGAATCGATATGA 1092
.||||||||||.||..||.||||||||||||||.|||||||||
RBAM_001100__ 1050 TTTAGAAATGAGTGCAAATAGACAGGAGGATGATTCGATATGA 1092
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.