Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00141 and RBAM_000920
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:56
# Commandline: needle
# -asequence dna-align/BSNT_00141___lysS.1.9828.seq
# -bsequence dna-align/RBAM_000920___lysS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00141___lysS-RBAM_000920___lysS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00141___lysS-RBAM_000920___lysS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00141___lysS
# 2: RBAM_000920___lysS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1500
# Identity: 1255/1500 (83.7%)
# Similarity: 1255/1500 (83.7%)
# Gaps: 0/1500 ( 0.0%)
# Score: 5295.0
#
#
#=======================================
BSNT_00141___ 1 ATGAGTCAAGAAGAGCATAACCATGAAGAATTGAATGATCAGCTGCAAGT 50
|||||||||||||||||.||.|||||.||||||||.||.|||||||||||
RBAM_000920__ 1 ATGAGTCAAGAAGAGCAAAATCATGAGGAATTGAACGACCAGCTGCAAGT 50
BSNT_00141___ 51 CAGACGCGATAAAATGAATCAGCTGAGAGATAACGGCATCGATCCATTCG 100
||||||.|||||||||||.|||||||||||.||||||||.||.||.||||
RBAM_000920__ 51 CAGACGAGATAAAATGAACCAGCTGAGAGAAAACGGCATTGACCCTTTCG 100
BSNT_00141___ 101 GCGCACGTTTTGAAAGAACTCATCAGTCTCAAGAAGTTATTTCGGCATAT 150
|||.||||||.||.|||||.|||||.||||||.|..|.|||...||.||.
RBAM_000920__ 101 GCGAACGTTTCGAGAGAACGCATCAATCTCAACAGATCATTGACGCCTAC 150
BSNT_00141___ 151 CAAGATCTAACCAAAGAAGAGTTAGAAGAAAAAGCGATTGAAGTTACAAT 200
||.||.||..|.||||||||..|.||||||||||||.|.|||||.||.||
RBAM_000920__ 151 CAGGAGCTTTCTAAAGAAGAACTGGAAGAAAAAGCGGTAGAAGTGACCAT 200
BSNT_00141___ 201 CGCAGGCCGCATGATGACAAAACGCGGCAAAGGAAAAGCCGGCTTTGCCC 250
.||||||||.|||||||||||.|||||.|||||.||||||||||||||.|
RBAM_000920__ 201 TGCAGGCCGTATGATGACAAAGCGCGGAAAAGGGAAAGCCGGCTTTGCGC 250
BSNT_00141___ 251 ATCTTCAGGATTTAGAAGGCCAAATCCAAATCTACGTAAGAAAAGACAGT 300
||||.|||||.||||||||.|||||.|||||.||||||||||||||||||
RBAM_000920__ 251 ATCTGCAGGACTTAGAAGGTCAAATTCAAATTTACGTAAGAAAAGACAGT 300
BSNT_00141___ 301 GTCGGTGACGACCAATATGAAATCTTCAAGTCTTCTGACCTCGGTGATCT 350
|||||.||.||.||||||||||||||.||.|||||.||||||||.||..|
RBAM_000920__ 301 GTCGGCGAAGAACAATATGAAATCTTTAAATCTTCAGACCTCGGAGACGT 350
BSNT_00141___ 351 TATCGGCGTAACCGGAAAAGTCTTCAAAACAAATGTAGGCGAATTGTCTG 400
|||||||.|.||.||.|||||.|||||||||||.||||||||..|.||||
RBAM_000920__ 351 TATCGGCATCACGGGGAAAGTTTTCAAAACAAACGTAGGCGAGCTTTCTG 400
BSNT_00141___ 401 TTAAAGCAACTTCCTTTGAATTGCTGACAAAAGCGCTTCGTCCGCTTCCT 450
|.|||||.||.||.||||||.|||||||||||||.||.|||||.||||||
RBAM_000920__ 401 TCAAAGCGACATCTTTTGAACTGCTGACAAAAGCACTGCGTCCTCTTCCT 450
BSNT_00141___ 451 GACAAATACCATGGTTTAAAAGACGTTGAGCAGCGCTACCGTCAGCGCTA 500
||.|||||.|||||.||||||||||||||.|||||.|||||.||||||||
RBAM_000920__ 451 GATAAATATCATGGGTTAAAAGACGTTGAACAGCGTTACCGCCAGCGCTA 500
BSNT_00141___ 501 CCTGGATCTTATCGTAAACCCAGACAGCAAACATACGTTTATTACACGAA 550
.||.|||||.|||||||||||.|||||||||||.||||||||.|||||.|
RBAM_000920__ 501 TCTCGATCTCATCGTAAACCCTGACAGCAAACAAACGTTTATCACACGCA 550
BSNT_00141___ 551 GCAAGATCATTCAAGCTATGAGAAGATACCTTGATGATCATGGATACTTA 600
||||.|||||.|||||.||||||||||||.|.|||||.||||||||||||
RBAM_000920__ 551 GCAAAATCATCCAAGCGATGAGAAGATACTTAGATGACCATGGATACTTA 600
BSNT_00141___ 601 GAAGTAGAAACACCTACAATGCACAGCATTCCTGGGGGAGCTTCTGCACG 650
|||||.|||||||||||.|||||||||||.||.||.|||||.|||||.||
RBAM_000920__ 601 GAAGTTGAAACACCTACGATGCACAGCATACCGGGAGGAGCGTCTGCGCG 650
BSNT_00141___ 651 TCCGTTTATCACTCACCACAACGCGTTAGACATTCCACTCTATATGCGTA 700
.|||||.|||||.|||||.||.|||.|.|||||.||.||.||||||||||
RBAM_000920__ 651 CCCGTTCATCACGCACCATAATGCGCTCGACATGCCTCTTTATATGCGTA 700
BSNT_00141___ 701 TTGCTATCGAACTGCACCTAAAACGTCTAATTGTCGGCGGTTTAGAAAAA 750
||||.||.|||||||||||.|||||.||.|||||||||||.|||||||||
RBAM_000920__ 701 TTGCGATTGAACTGCACCTGAAACGCCTGATTGTCGGCGGATTAGAAAAA 750
BSNT_00141___ 751 GTATATGAAATCGGCCGTGTTTTCCGTAACGAAGGTGTCTCTACACGCCA 800
||.||.|||||||||||.||.||||||||.||||||||.|||||||||||
RBAM_000920__ 751 GTCTACGAAATCGGCCGCGTGTTCCGTAATGAAGGTGTTTCTACACGCCA 800
BSNT_00141___ 801 TAACCCTGAATTTACAATGATTGAGTTATATGAAGCATATGCGGACTATA 850
||||||||||||.||.|||||.|||.|.||||||||.||.||.||.||||
RBAM_000920__ 801 TAACCCTGAATTCACGATGATCGAGCTGTATGAAGCGTACGCCGATTATA 850
BSNT_00141___ 851 AAGATATCATGAGCTTAACTGAAAACCTTGTCGCTCATATCGCCCAAGAA 900
|||||||.||||||.|.||.|||||.||.||.||.|||||.||.||.|||
RBAM_000920__ 851 AAGATATTATGAGCCTTACGGAAAATCTCGTTGCACATATTGCGCAGGAA 900
BSNT_00141___ 901 GTGCTTGGCACAACTACGATTCAATACGGGGAAGAGCAAATCGACCTTAA 950
||||||||.|..||.||.||.||.|||||.||||||||.||.||.||.||
RBAM_000920__ 901 GTGCTTGGAAGCACCACAATCCAGTACGGCGAAGAGCAGATTGATCTGAA 950
BSNT_00141___ 951 ACCGGAGTGGAAAAGAATCCATATGGTTGACGCAGTCAAAGAAGCGACCG 1000
|||.|||||||||.||.||||.|||||.||.||.||||||||||||||.|
RBAM_000920__ 951 ACCTGAGTGGAAACGACTCCACATGGTAGATGCGGTCAAAGAAGCGACAG 1000
BSNT_00141___ 1001 GCGTTGATTTCTGGGAAGAGGTTACTGTTGAACAGGCGCGTGAATATGCA 1050
|.||.|||||||||.|.|||.|.|||||||||.|.|||||.|...|||||
RBAM_000920__ 1001 GTGTAGATTTCTGGAATGAGATGACTGTTGAAGAAGCGCGCGGTCATGCA 1050
BSNT_00141___ 1051 AAAGAACATGGAGTAGAAATTAAAGACTCTATGACAGTAGGCCATATCAT 1100
|||||.|||||..|.||.||.|.|.||||.|||||.||.||.||||||||
RBAM_000920__ 1051 AAAGAGCATGGTATCGAGATCACAAACTCAATGACGGTGGGTCATATCAT 1100
BSNT_00141___ 1101 CAACGAATTCTTCGAACAAAAAATTGAAGAAACGCTTATTCAGCCAACGT 1150
|||.|||||||||||||||||||||||||||||.||.||||||||.||.|
RBAM_000920__ 1101 CAATGAATTCTTCGAACAAAAAATTGAAGAAACACTCATTCAGCCTACAT 1150
BSNT_00141___ 1151 TTATTTACGGGCATCCTGTAGAAATTTCTCCTCTTGCTAAGAAAAACCCT 1200
||||||||||.||.||||||||.|||||||||||||||||||||||.||.
RBAM_000920__ 1151 TTATTTACGGCCACCCTGTAGAGATTTCTCCTCTTGCTAAGAAAAATCCG 1200
BSNT_00141___ 1201 GAGGACCCGCGTTTTACAGACCGTTTTGAGCTGTTTATCGTTGGCCGTGA 1250
||||||||.||.|||||||||||||||||||||||||||||.||||||||
RBAM_000920__ 1201 GAGGACCCTCGCTTTACAGACCGTTTTGAGCTGTTTATCGTCGGCCGTGA 1250
BSNT_00141___ 1251 ACATGCCAACGCGTTTACAGAGCTGAATGATCCTATTGATCAAAGAGAAC 1300
.|||||.||.||||||||.|||||||||||.|||||.||.||.||.||||
RBAM_000920__ 1251 GCATGCTAATGCGTTTACGGAGCTGAATGACCCTATCGACCAGAGGGAAC 1300
BSNT_00141___ 1301 GCTTTGAAGCGCAATTAAAAGAGCGTGAAGCCGGTAATGATGAAGCTCAT 1350
|||||||||||||.||||||||..|.||||..||.||.||||||||.|||
RBAM_000920__ 1301 GCTTTGAAGCGCAGTTAAAAGAAAGAGAAGAAGGAAACGATGAAGCGCAT 1350
BSNT_00141___ 1351 CTAATGGATGAAGACTTTGTTGAAGCTCTGGAATACGGTATGCCGCCAAC 1400
.|.||||||||||||||.|||||||||||.||||||||.||||||||.||
RBAM_000920__ 1351 ATGATGGATGAAGACTTCGTTGAAGCTCTTGAATACGGCATGCCGCCGAC 1400
BSNT_00141___ 1401 AGGAGGTTTAGGCATCGGTATCGACCGTCTGGTTATGCTGCTGACGAATG 1450
.||.||.||.||.||||||||||||||.||.||.||||||.|.||.||||
RBAM_000920__ 1401 CGGGGGATTGGGTATCGGTATCGACCGCCTTGTCATGCTGTTAACAAATG 1450
BSNT_00141___ 1451 CCCCTTCTATTCGCGATGTGCTGTTATTCCCGCAAATGAGACAACGCTAA 1500
|.||.|||||..|.||.||..|.||||||||.|||||||||||||||||.
RBAM_000920__ 1451 CTCCGTCTATCAGAGACGTTTTATTATTCCCTCAAATGAGACAACGCTAG 1500
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