Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00136 and RBAM_000900

See Amino acid alignment / Visit BSNT_00136 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:56
# Commandline: needle
#    -asequence dna-align/BSNT_00136___folK.1.9828.seq
#    -bsequence dna-align/RBAM_000900___folK.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00136___folK-RBAM_000900___folK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00136___folK-RBAM_000900___folK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00136___folK
# 2: RBAM_000900___folK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 512
# Identity:     402/512 (78.5%)
# Similarity:   402/512 (78.5%)
# Gaps:          16/512 ( 3.1%)
# Score: 1531.0
# 
#
#=======================================

BSNT_00136___      1 ATGAACAACATAGCTTATATTGCACTTGGATCTAATATTGGAGATAGAGA     50
                     ||||||||.|..||.|||||.|..||.||.||.|||||.||.||..|.||
RBAM_000900__      1 ATGAACAATACGGCATATATCGGTCTCGGCTCCAATATGGGCGACCGTGA     50

BSNT_00136___     51 AACGTATTTAAGGCAAGCAGTGGCTTCACTGCATCA----GCATGCTGCG     96
                     |...|||||..|.||.||||||||  || ||| |||    ||||..||..
RBAM_000900__     51 ACATTATTTGCGCCAGGCAGTGGC--CA-TGC-TCAGCCGGCATCATGGC     96

BSNT_00136___     97 GTGACAGTCACTAAAGTGTCGTCTATTTACGAAACTGACCCGGTCGGATA    146
                     |||||.||..|.||.|||||.||.||.||.|||||.||.||.|||||.||
RBAM_000900__     97 GTGACGGTGTCAAAGGTGTCCTCCATATATGAAACAGATCCCGTCGGCTA    146

BSNT_00136___    147 CGAAGATCAAGCTCAATTTTTGAATATGGCTGTTGAAATCAAGACATCAT    196
                     .||.|||||||.|||.|||.|.||||||||.||||||.|.||.||.||.|
RBAM_000900__    147 TGAGGATCAAGATCAGTTTCTTAATATGGCGGTTGAAGTGAAAACGTCGT    196

BSNT_00136___    197 TGAAC-CCTTTTGAACTCCTTGAACTGACGCAGCAG-ATAGAAAATGAAT    244
                     | |.| |||||||||||.|||||..|.|||||| || ||.|||..|||||
RBAM_000900__    197 T-ATCTCCTTTTGAACTTCTTGATGTAACGCAG-AGCATTGAAGCTGAAT    244

BSNT_00136___    245 TAGGCAGAACAAGGGAAGTAAGATGGGGGCCGCGGACGGCAGACCTTGAC    294
                     ||||||||||.||.||..|..|.|||||.|||||||||||||||||||||
RBAM_000900__    245 TAGGCAGAACGAGAGAGATTCGCTGGGGACCGCGGACGGCAGACCTTGAC    294

BSNT_00136___    295 ATTTTGTTATTTAATCGTGAAAATATTGAATCAGAGCAACTAATTGTTCC    344
                     ||||||.|.|.|||||||||||||||||||.||||||..||.||||||||
RBAM_000900__    295 ATTTTGCTGTATAATCGTGAAAATATTGAAACAGAGCGGCTGATTGTTCC    344

BSNT_00136___    345 GCATCCGAGAATGTATGAGCGTTTGTTTGTCCTTGCGCCGCTTGCGGAAA    394
                     |||||||||||||||||||||.||.|||||||||||||||.|....||||
RBAM_000900__    345 GCATCCGAGAATGTATGAGCGCTTATTTGTCCTTGCGCCGTTAAAAGAAA    394

BSNT_00136___    395 TTTGCCAGCAGGTTGA--AAAAGAGGCTACAAGCGCCGAAACAGACCAAG    442
                     |.||.|.|||||..||  |.|..|  |.|.||||||.||||||.||||||
RBAM_000900__    395 TATGTCCGCAGGCGGATCATATCA--CGATAAGCGCTGAAACAAACCAAG    442

BSNT_00136___    443 AAGGTGTAAGAGTATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCAT    492
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
RBAM_000900__    443 AAGGTGTAAGAGTATGGAAGCAGAAATCTGGGGTAGGCGAATTCGTGCAT    492

BSNT_00136___    493 TCAGAAAGCTGA    504
                     ||||||||||||
RBAM_000900__    493 TCAGAAAGCTGA    504


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