Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00128 and RBAM_000840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00128___cysK.1.9828.seq
# -bsequence dna-align/RBAM_000840___cysK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00128___cysK-RBAM_000840___cysK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00128___cysK-RBAM_000840___cysK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00128___cysK
# 2: RBAM_000840___cysK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 928
# Identity: 754/928 (81.2%)
# Similarity: 754/928 (81.2%)
# Gaps: 2/928 ( 0.2%)
# Score: 3062.0
#
#
#=======================================
BSNT_00128___ 1 ATGGTACGTGTAGCAAACTCCATTACTGAATTAATTGGGAATACGCCAAT 50
|||||.|||.|.|||||.||.||||.||||.||||.||.|||||.||.||
RBAM_000840__ 1 ATGGTGCGTATTGCAAATTCTATTATTGAACTAATCGGAAATACTCCTAT 50
BSNT_00128___ 51 CGTTAAATTAAATCGCCTTGCAGATGAAAACAGTGCGGATGTATATCTAA 100
.||.|||||.||||||||..|.||||||||||||||.|||||||||||.|
RBAM_000840__ 51 TGTGAAATTGAATCGCCTGACGGATGAAAACAGTGCAGATGTATATCTGA 100
BSNT_00128___ 101 AACTTGAATACATGAACCCTGGAAGCAGTGTAAAAGACCGTATCGGTTTA 150
|.||||||||||||||.||.||.|||||.|||||||||||||||||..|.
RBAM_000840__ 101 AGCTTGAATACATGAATCCGGGCAGCAGCGTAAAAGACCGTATCGGAGTG 150
BSNT_00128___ 151 GCCATGATTGAAGCGGCTGAAAAAGAAGGAAAATTAAAAGCCGGTGATAC 200
||.|||||||||||||||||||||||||||||||||||||||||.||.||
RBAM_000840__ 151 GCGATGATTGAAGCGGCTGAAAAAGAAGGAAAATTAAAAGCCGGCGACAC 200
BSNT_00128___ 201 GATCATTGAACCGACAAGCGGAAATACAGGAATCGGGCTTGCAATGGTTG 250
.|||||||||||||||||||||||||||||.|||||.|||||.|||||.|
RBAM_000840__ 201 AATCATTGAACCGACAAGCGGAAATACAGGGATCGGTCTTGCTATGGTGG 250
BSNT_00128___ 251 CTGCTGCTAAAGGATTAAAAGCCATTTTGGTTATGCCTGATACAATGAGC 300
|.||.||||||||..|.|.|||||||.|.||||||||||||||||||||.
RBAM_000840__ 251 CAGCGGCTAAAGGTCTCAGAGCCATTCTCGTTATGCCTGATACAATGAGT 300
BSNT_00128___ 301 ATGGAGCGCCGCAACCTTCTTCGTGCATACGGTGCTGAGCTTGTGCTGAC 350
||||||||.|||||.||.||.||.||||||||.||.||||||||||||||
RBAM_000840__ 301 ATGGAGCGACGCAATCTGCTGCGCGCATACGGAGCGGAGCTTGTGCTGAC 350
BSNT_00128___ 351 TCCTGGTGCGGAAGGCATGAAAGGCGCCATTAAGAAAGCTGAAGAGCTTG 400
|||.||.||.|||||.|||||.|||||||||||.||.||.|||||.||||
RBAM_000840__ 351 TCCCGGCGCAGAAGGAATGAAGGGCGCCATTAAAAAGGCGGAAGAACTTG 400
BSNT_00128___ 401 CTGAAAAGCACGGATATTTTGTGCCTCAGCAGTTTAACAACCCTTCTAAC 450
|.||..|.||||||||.||||||||||||||.||.|||||..|..|.|||
RBAM_000840__ 401 CCGAGGAACACGGATACTTTGTGCCTCAGCAATTCAACAATGCGGCAAAC 450
BSNT_00128___ 451 CCAGAAATTCACCGCCAAACAACAGGTAAAGAAATCGTTGAGCAATTCGG 500
||.|||||||||||||||||.||.||.|||||||||||.||.||.||.||
RBAM_000840__ 451 CCGGAAATTCACCGCCAAACGACGGGGAAAGAAATCGTAGAACAGTTTGG 500
BSNT_00128___ 501 TGATGACCAGCTTGACGCATTTGTAGCTGGAATCGGAACGGGCGGAACGA 550
|||.|||||||||||.||.||.||.||.||||||||.||.||||||||.|
RBAM_000840__ 501 TGACGACCAGCTTGATGCGTTCGTGGCCGGAATCGGTACCGGCGGAACCA 550
BSNT_00128___ 551 TTACGGGAGCGGGCGAAGTGCTGAAGGAAGCGTACCCTTCCATTAAGATT 600
|.|||||||||||||||||||||||.|||||.||.||.|||||.||.||.
RBAM_000840__ 551 TCACGGGAGCGGGCGAAGTGCTGAAAGAAGCATATCCATCCATCAAAATC 600
BSNT_00128___ 601 TATGCTGTTGAACCGTCAGATTCCCCAGTGCTTTCAGGAGGAAAACCAGG 650
|||||.||.||.|||.|.|||||.|||||.|||||.||.||||||||.||
RBAM_000840__ 601 TATGCGGTAGAGCCGGCGGATTCTCCAGTTCTTTCCGGCGGAAAACCGGG 650
BSNT_00128___ 651 CCCCCACAAAATTCAGGGAATCGGAGCTGGATTCGTGCCGGACATCTTAA 700
|||.||.|||||||||||.||||||||.|||||.||.||.||.|..||.|
RBAM_000840__ 651 CCCGCATAAAATTCAGGGTATCGGAGCGGGATTTGTCCCTGAAACATTGA 700
BSNT_00128___ 701 ACACTGAAGTATATGATGAAATC-TTCCCTGTGAAGAATGAAGAAGCATT 749
|.||.||..|.||||||.|.||| ||||| ||.||.||.||.||.|||||
RBAM_000840__ 701 ATACGGACATCTATGATCAGATCATTCCC-GTCAAAAACGAGGATGCATT 749
BSNT_00128___ 750 CGAATATGCCCGCAGAGCTGCACGTGAAGAAGGAATTCTCGGAGGCATCT 799
.|||||||||||.|.|.|.|||...||||||||.||||||||.|||||.|
RBAM_000840__ 750 TGAATATGCCCGTAAAACGGCAAAAGAAGAAGGGATTCTCGGCGGCATTT 799
BSNT_00128___ 800 CATCAGGTGCTGCAATTTATGCTGCTCTTCAAGTAGCAAAAAAACTCGGA 849
|.||.||.||.||.|||||.||.||.||..||.|.||.||||||||.||.
RBAM_000840__ 800 CTTCCGGAGCGGCCATTTACGCGGCACTGGAAATCGCGAAAAAACTGGGG 849
BSNT_00128___ 850 AAAGGCAAAAAAGTATTGGCCATCATTCCAAGTAACGGCGAACGTTATCT 899
||||||||.|||||..|.||.|||||.||.||||||||.||||||||..|
RBAM_000840__ 850 AAAGGCAAGAAAGTGCTTGCGATCATCCCTAGTAACGGAGAACGTTACTT 899
BSNT_00128___ 900 AAGCACGCCGCTGTATCAATTCGATTAA 927
||||||.|||||.|||||.||.||.||.
RBAM_000840__ 900 AAGCACACCGCTTTATCAGTTTGAATAG 927
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