Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00121 and RBAM_000800
See
Amino acid alignment /
Visit
BSNT_00121 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:55
# Commandline: needle
# -asequence dna-align/BSNT_00121___ftsH.1.9828.seq
# -bsequence dna-align/RBAM_000800___ftsH.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00121___ftsH-RBAM_000800___ftsH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00121___ftsH-RBAM_000800___ftsH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00121___ftsH
# 2: RBAM_000800___ftsH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1927
# Identity: 1653/1927 (85.8%)
# Similarity: 1653/1927 (85.8%)
# Gaps: 20/1927 ( 1.0%)
# Score: 7153.5
#
#
#=======================================
BSNT_00121___ 1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000800__ 1 ATGAATCGGGTCTTCCGTAATACCATTTTTTATTTACTTATTTTATTAGT 50
BSNT_00121___ 51 AGTAATCGGGGTTGTGAGCTACTTCCAGACCTCAAATCCGAAAACAGAAA 100
||||||||||||||||||.|||||||||||.|||||.|||||||||||||
RBAM_000800__ 51 AGTAATCGGGGTTGTGAGTTACTTCCAGACTTCAAACCCGAAAACAGAAA 100
BSNT_00121___ 101 ATATGTCGTACAGTACGTTCATCAAAAACCTGGATGACGGGAAAGTTGAT 150
|||||||||||||||||||.|||||.|||||.|||||.||||||||||||
RBAM_000800__ 101 ATATGTCGTACAGTACGTTTATCAAGAACCTCGATGAGGGGAAAGTTGAT 150
BSNT_00121___ 151 AGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGAGGTAAAAGGGCAGCT 200
||||||||||||||||||||||||||||||||||||||||||||.|||||
RBAM_000800__ 151 AGCGTATCGGTTCAGCCTGTCAGAGGTGTTTATGAGGTAAAAGGACAGCT 200
BSNT_00121___ 201 GAAAAACTACGACAAAGATCAATACTTTTTGACTCATGTTCCTGAAGGAA 250
||||||.|||||||||||.||.||||||||.||.||||||||||||||||
RBAM_000800__ 201 GAAAAAATACGACAAAGACCAGTACTTTTTAACACATGTTCCTGAAGGAA 250
BSNT_00121___ 251 AGGGAGCAGACCAGATATTTAACGCTTTGAAAAAGACAGACGTAAAGGTT 300
|.||||||||||||||||||.|.||..|.||||||||.||||||||.|||
RBAM_000800__ 251 AAGGAGCAGACCAGATATTTGATGCAATTAAAAAGACGGACGTAAAAGTT 300
BSNT_00121___ 301 GAGCCCGCTCAAGAAACAAGCGGATGGGTGACGTTCCTGACGACCATCAT 350
||.|||||.||.|||||||||||.||||||||||||.|.|||||.|||||
RBAM_000800__ 301 GATCCCGCACAGGAAACAAGCGGGTGGGTGACGTTCTTAACGACGATCAT 350
BSNT_00121___ 351 CCCATTTGTCATTATCTTTATTCTGTTTTTCTTCCTGCTCAATCAGGCTC 400
.||.||||||||.|||||||||||||||||||||||||||||||||||||
RBAM_000800__ 351 TCCGTTTGTCATCATCTTTATTCTGTTTTTCTTCCTGCTCAATCAGGCTC 400
BSNT_00121___ 401 AAGGTGGCGGCAGCCGTGTCATGAACTTTGGCAAGAGTAAAGCGAAGCTG 450
|.||.|||||||||||||||||||||||.||.|||||.||||||||||||
RBAM_000800__ 401 AGGGCGGCGGCAGCCGTGTCATGAACTTCGGAAAGAGCAAAGCGAAGCTG 450
BSNT_00121___ 451 TATACAGAGGAAAAGAAACGCGTCAAATTTAAAGACGTTGCAGGGGCTGA 500
|||||.||.||||||||||||||.||.||||||||.||.||.||.||.||
RBAM_000800__ 451 TATACGGAAGAAAAGAAACGCGTGAAGTTTAAAGATGTAGCCGGCGCGGA 500
BSNT_00121___ 501 CGAAGAAAAGCAAGAACTTGTTGAAGTTGTTGAGTTTCTGAAAGATCCCC 550
.||.||.|||||.||.||||||||.|||||||||||||||||||||||.|
RBAM_000800__ 501 TGAGGAGAAGCAGGAGCTTGTTGAGGTTGTTGAGTTTCTGAAAGATCCTC 550
BSNT_00121___ 551 GCAAGTTTGCCGAGCTTGGCGCCAGAATACCGAAAGGCGTGCTTTTAGTC 600
||||.||.||||||||||||||||||||.||.|||||||||||.||.|||
RBAM_000800__ 551 GCAAATTCGCCGAGCTTGGCGCCAGAATCCCTAAAGGCGTGCTGTTGGTC 600
BSNT_00121___ 601 GGACCTCCGGGTACCGGTAAAACATTGCTTGCCAAGGCTTGTGCAGGTGA 650
|||||||||||.||||||||.||..|||||||.|..||.|..||.|||||
RBAM_000800__ 601 GGACCTCCGGGAACCGGTAAGACGCTGCTTGCGAGAGCCTCAGCCGGTGA 650
BSNT_00121___ 651 AGCCGGCGTACCTTTCTTCAGCATCAGCGGATCTGATTTCGTTGAAATGT 700
|||.|||||.||||||||||||||||||||||||||.|||||||||||||
RBAM_000800__ 651 AGCAGGCGTTCCTTTCTTCAGCATCAGCGGATCTGACTTCGTTGAAATGT 700
BSNT_00121___ 701 TTGTAGGGGTCGGTGCTTCCCGTGTGCGTGACTTGTTTGAAAATGCAAAA 750
||||.||.|||||||||||||||||||||||.||.||.||||||||.|||
RBAM_000800__ 701 TTGTCGGTGTCGGTGCTTCCCGTGTGCGTGATTTATTCGAAAATGCGAAA 750
BSNT_00121___ 751 AAGAATGCGCCTTGTTTGATTTTCATTGATGAAATTGATGCAGTCGGACG 800
|||||||||||||||.||||||||||||||||.||.||.||.||.|||||
RBAM_000800__ 751 AAGAATGCGCCTTGTCTGATTTTCATTGATGAGATCGACGCGGTGGGACG 800
BSNT_00121___ 801 CCAGCGTGGTGCTGGTCTCGGCGGTGGACACGATGAACGTGAACAGACGC 850
.|||||.||.||.|||||.|||||.||.||.||||||||.||||||||||
RBAM_000800__ 801 TCAGCGCGGCGCAGGTCTTGGCGGCGGGCATGATGAACGCGAACAGACGC 850
BSNT_00121___ 851 TAAACCAATTGCTTGTTGAAATGGACGGATTCAGCGCTAATGAAGGAATT 900
|.|||||..|||||||.||.||||||||.|||||.||.|||||||||||.
RBAM_000800__ 851 TGAACCAGCTGCTTGTAGAGATGGACGGTTTCAGTGCGAATGAAGGAATC 900
BSNT_00121___ 901 ATCATCATTGCTGCGACGAACCGTGCGGACA-TCTTGGACCCAGCCTTAC 949
||.||.||.||||||||.||||||||||||| |||| |||||.||.||.|
RBAM_000800__ 901 ATTATTATCGCTGCGACAAACCGTGCGGACATTCTT-GACCCCGCATTGC 949
BSNT_00121___ 950 TTCGTCCGGGACGTTTTGACCGTCAAATCACAGTGGACCGCCCAGATGTC 999
|||||||||||||||||||||||||.||.||.||.|||||.||.||||||
RBAM_000800__ 950 TTCGTCCGGGACGTTTTGACCGTCAGATTACGGTAGACCGTCCGGATGTC 999
BSNT_00121___ 1000 ATTGGCCGTGAAGCTGTATTGAAAGTCCATGCGAGAAACAAACCGCTGGA 1049
||.|||||||||||.|||||..|.|||||||||||||||||||||||.||
RBAM_000800__ 1000 ATCGGCCGTGAAGCCGTATTACAGGTCCATGCGAGAAACAAACCGCTTGA 1049
BSNT_00121___ 1050 TGAAACGGTTAACCTAAAATCAATTGC--CATGAGAACACCAGGCTTCTC 1097
|||||||||.|||.|||||.||||.|| || ||||||||.||.|||||
RBAM_000800__ 1050 TGAAACGGTGAACTTAAAAGCAATCGCTTCA--AGAACACCCGGTTTCTC 1097
BSNT_00121___ 1098 AGGCGCTGACTTAGAAAATC-TCTTGAATGAAGCTGCGCTTGTAGCAGCT 1146
||||||.||.||||||||.| |||| ||.|||||.||.|||||.||.||.
RBAM_000800__ 1098 AGGCGCCGATTTAGAAAACCTTCTT-AACGAAGCGGCACTTGTTGCTGCC 1146
BSNT_00121___ 1147 CGTCAAAACAAGAAAAAAATCGATGCGCGTGATATTGACGAAGCGACGGA 1196
||||||||||||||.|||||.|||..|||.||.|||||.|||||||||||
RBAM_000800__ 1147 CGTCAAAACAAGAAGAAAATTGATATGCGCGACATTGATGAAGCGACGGA 1196
BSNT_00121___ 1197 CCGTGTAATTGCCGGACCTGCTAAGAAGAGCCGCGTTATCTCCAAGAAAG 1246
||||||.|||||.||.|||||.||||||||||||||.||.||.||.||||
RBAM_000800__ 1197 CCGTGTCATTGCGGGTCCTGCGAAGAAGAGCCGCGTCATATCGAAAAAAG 1246
BSNT_00121___ 1247 AACGCAATATCGTGGCTTATCACGAAGGCGGACACACCGTTATCGGACTC 1296
||||||||||||||||.||.|||||.|||||.|||||||||||||||||.
RBAM_000800__ 1247 AACGCAATATCGTGGCGTACCACGAGGGCGGTCACACCGTTATCGGACTT 1296
BSNT_00121___ 1297 GTTTTAGATGAGGCAGATATGGTTCATAAAGTAACGATTGTTCCTCGGGG 1346
||..|.|||||.||.|||||||||||||||||||||||.|||||..||||
RBAM_000800__ 1297 GTGCTGGATGAAGCCGATATGGTTCATAAAGTAACGATCGTTCCGAGGGG 1346
BSNT_00121___ 1347 CCAGGCTGGCGGTTATGCTGTTATGCTGCCAAGAGAAGACCGTTATTTCC 1396
.|||||.|||||.||.||.||.|||||.||.||||||||||||||.||||
RBAM_000800__ 1347 GCAGGCGGGCGGATACGCGGTCATGCTTCCGAGAGAAGACCGTTACTTCC 1396
BSNT_00121___ 1397 AAACAAAGCCGGAACTGCTTGATAAAATTGTCGGCCTCTTGGGCGGACGT 1446
|.|||||.||.|||||.||.||||||||||||||.||..||||||||||.
RBAM_000800__ 1397 AGACAAAACCTGAACTTCTCGATAAAATTGTCGGTCTTCTGGGCGGACGG 1446
BSNT_00121___ 1447 GTTGCTGAAGAGATTATCTTCGGTGAAGTCAGCACAGGGGCGCACAATGA 1496
|||||.||.||.|||||||||||.|||||||||||.|||||.||||||||
RBAM_000800__ 1447 GTTGCCGAGGAAATTATCTTCGGCGAAGTCAGCACGGGGGCTCACAATGA 1496
BSNT_00121___ 1497 CTTCCAGCGTGCGACGAATATTGCAAGACGAATGGTTACGGAATTCGGTA 1546
|||||||||.||.||||..|||||.|||.|||||||.||.||.|||||||
RBAM_000800__ 1497 CTTCCAGCGGGCAACGAGCATTGCCAGAAGAATGGTGACAGAGTTCGGTA 1546
BSNT_00121___ 1547 TGTCAGAAAAACTGGGACCGTTGCAATTTGGACAGTCTCAGGGCGGTCAG 1596
|||||||||||||.||||||.|.||.||.||.||.|||||.||||||||.
RBAM_000800__ 1547 TGTCAGAAAAACTCGGACCGCTTCAGTTCGGTCAATCTCAAGGCGGTCAA 1596
BSNT_00121___ 1597 GTATTCTTAGGCCGTGATTTCAACAACGAACAGAACTACAGTGATCAAAT 1646
||||||.|.|||||.||||||||||||||.|||||||||||||||||.||
RBAM_000800__ 1597 GTATTCCTGGGCCGGGATTTCAACAACGAGCAGAACTACAGTGATCAGAT 1646
BSNT_00121___ 1647 CGCTTACGAAATTGATCAGGAAATTCAGCGCATCATCAAAGAATGTTATG 1696
||||||||||||.|||||||||||||||||||||||.|||||||||||||
RBAM_000800__ 1647 CGCTTACGAAATCGATCAGGAAATTCAGCGCATCATTAAAGAATGTTATG 1696
BSNT_00121___ 1697 AGCGTGCGAAACAAATCCTGACTGAAAATCGTGACAAGCTTGAATTGATT 1746
|||||||||||...|||||||||||||||||.||.|||||||||||||||
RBAM_000800__ 1697 AGCGTGCGAAAACCATCCTGACTGAAAATCGCGATAAGCTTGAATTGATT 1746
BSNT_00121___ 1747 GCCCAAACGCTTCTGAAAGTTGAAACGCTTGACGCTGAACAGATCAAACA 1796
||.||.||..|.||..|.||.|||||..|.||.||.|||||.|||||.||
RBAM_000800__ 1747 GCTCAGACATTGCTTGATGTGGAAACATTAGATGCGGAACAAATCAAGCA 1796
BSNT_00121___ 1797 CCTTATCGATCATGGAACATTACCTGAGCGTAATTTCTCAGATGA----- 1841
.||..|.|||||.||||.|.|.||||||||.||||||||||||||
RBAM_000800__ 1797 TCTCGTGGATCACGGAAAACTCCCTGAGCGCAATTTCTCAGATGACCATC 1846
BSNT_00121___ 1842 -TGAAAAGAACGATGATGTGAAAGTAAACATTCTGACAAAAACAGAA--- 1887
|.|| ||.||.|||||||||||||||||.|||.|.|||||||||
RBAM_000800__ 1847 TTCAA---AAAGACGATGTGAAAGTAAACATCCTGTCTAAAACAGAAGAC 1893
BSNT_00121___ 1888 GAAAAGAAAGACGATACGAAGGAGTAA 1914
||||||||||||||..||||.||.||.
RBAM_000800__ 1894 GAAAAGAAAGACGAGCCGAAAGAATAG 1920
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.