Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00116 and RBAM_000760

See Amino acid alignment / Visit BSNT_00116 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:54
# Commandline: needle
#    -asequence dna-align/BSNT_00116___yabS.1.9828.seq
#    -bsequence dna-align/RBAM_000760___yabS.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00116___yabS-RBAM_000760___yabS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00116___yabS-RBAM_000760___yabS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00116___yabS
# 2: RBAM_000760___yabS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 738
# Identity:     598/738 (81.0%)
# Similarity:   598/738 (81.0%)
# Gaps:           0/738 ( 0.0%)
# Score: 2430.0
# 
#
#=======================================

BSNT_00116___      1 GTGAACAACGGACATTTAAATCAAATTTTGCTGATAACGGATGGCTGCTC     50
                     |||||.||.|||||||||||||||.||.|||||||.||.|||||||||||
RBAM_000760__      1 GTGAATAAGGGACATTTAAATCAAGTTCTGCTGATTACAGATGGCTGCTC     50

BSNT_00116___     51 AAACCATGGGGAAGACCCGCTTGCAATGGCTGCTTTTGCTAAAGAGCAGG    100
                     .||.|||||.|||||||||.|.||||||||.|||||.||.||.|||||||
RBAM_000760__     51 CAATCATGGTGAAGACCCGATCGCAATGGCGGCTTTCGCCAAGGAGCAGG    100

BSNT_00116___    101 GGATTACGGTAAATGTTATTGGTATAATGGAAGAAAATCAAATTGACCCT    150
                     ||||||||||.||||||||.||.||.|||||||||||....|||||||..
RBAM_000760__    101 GGATTACGGTGAATGTTATAGGAATTATGGAAGAAAACGCGATTGACCAA    150

BSNT_00116___    151 GAGGCAATGAAGGAAGTCGAAGGGATTGCACTTGCCGGAGGAGGCGTGCA    200
                     ||.||||||||||||||.|||||.||.||..|.||||||||.|||||.||
RBAM_000760__    151 GAAGCAATGAAGGAAGTTGAAGGCATCGCCATGGCCGGAGGCGGCGTCCA    200

BSNT_00116___    201 CCAAGTCGTTTATGCATCTCAGCTTTCACAAACTGTTCAAATGGTAACAA    250
                     .|||||.||.|||||.||.||..|.||.||.||.|||||||||||.||.|
RBAM_000760__    201 TCAAGTTGTGTATGCGTCACAATTGTCTCAGACGGTTCAAATGGTGACGA    250

BSNT_00116___    251 AAAAAGCGATGACGCAAACCTTACAAGGTGTAGTCAATCAAGAACTGAAA    300
                     |||||||.|||||.||.||..|.||||||||.|||||||||||.||.|||
RBAM_000760__    251 AAAAAGCAATGACCCAGACGCTGCAAGGTGTCGTCAATCAAGAGCTTAAA    300

BSNT_00116___    301 CAGATTCTCGGAAAGAATGTGGAAATGGAAGAGCTTTCCCCGGAAAAACG    350
                     ||.||..|.||.||.||.||.|||||||||||||||||.||.||||||||
RBAM_000760__    301 CAAATCTTAGGGAAAAACGTTGAAATGGAAGAGCTTTCTCCTGAAAAACG    350

BSNT_00116___    351 CGGCGAAGTCATGGAAGTGGTAGACGAGCTTGGAGAAACGGTGCATCTTC    400
                     |||||||||.|||||||||||.||.||.||.||.||||||||.|||||.|
RBAM_000760__    351 CGGCGAAGTGATGGAAGTGGTTGATGAACTCGGCGAAACGGTTCATCTGC    400

BSNT_00116___    401 AGGTTTTGGTTCTTGTTGATACAAGTGCAAGTATGGCGCCAAAGCTTCCA    450
                     |.||..|.||.||.||||||||.|||||.|||||||||||.||.||.||.
RBAM_000760__    401 AAGTGCTTGTGCTGGTTGATACGAGTGCGAGTATGGCGCCGAAACTGCCG    450

BSNT_00116___    451 ACAGTAAAAGAGGCACTGATTGATTTGTCTGTAAGCCTCAATTCTCGAAT    500
                     ||.||.|||||.||.|||||.|||.|.||..|.||..|.|||||.||...
RBAM_000760__    451 ACGGTGAAAGAAGCGCTGATCGATCTTTCCATCAGTTTAAATTCCCGGGC    500

BSNT_00116___    501 CGGGAATAACGAATTTGCGATGTGTATATTTCCCGGGAAAAAACAAGAGG    550
                     ||||.|.||.||||||||.||||||||||||||||||||||..||.||.|
RBAM_000760__    501 CGGGCAAAATGAATTTGCAATGTGTATATTTCCCGGGAAAAGCCAGGAAG    550

BSNT_00116___    551 TCGAGCTTGTGCTGAACTGGACACCGAAGCTGCAATCTCTTTCCACACTC    600
                     |.||||||||||||||.|||||.||||||||..||||.|||||..|||||
RBAM_000760__    551 TTGAGCTTGTGCTGAATTGGACGCCGAAGCTTGAATCCCTTTCTGCACTC    600

BSNT_00116___    601 TTTGCAAAGCTTTCGACAGGCGGCATCACGCCGACAGGTCCGGCAATTCG    650
                     |||||.|||||.|||||.|||||.|||||.||.||.||.||.||.||.||
RBAM_000760__    601 TTTGCGAAGCTGTCGACCGGCGGTATCACCCCTACGGGCCCCGCTATCCG    650

BSNT_00116___    651 TGAAGCGACACTGCAGTTTGAAAAAATACGCTCAAGAAGGGGCATGCTGG    700
                     .|||||.||.|.|||||||||.|.|||.||||||||||||.|||||.|||
RBAM_000760__    651 GGAAGCAACGCAGCAGTTTGAGAGAATCCGCTCAAGAAGGAGCATGTTGG    700

BSNT_00116___    701 CAGATGATGAACGACGCTTTGACGAGTTTGGCATGTAG    738
                     ||||||||||||||||||||.|||||||||||||||||
RBAM_000760__    701 CAGATGATGAACGACGCTTTAACGAGTTTGGCATGTAG    738


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