Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00101 and RBAM_000700
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:53
# Commandline: needle
# -asequence dna-align/BSNT_00101___yabQ.1.9828.seq
# -bsequence dna-align/RBAM_000700___yabQ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00101___yabQ-RBAM_000700___yabQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00101___yabQ-RBAM_000700___yabQ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00101___yabQ
# 2: RBAM_000700___yabQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 668
# Identity: 488/668 (73.1%)
# Similarity: 488/668 (73.1%)
# Gaps: 64/668 ( 9.6%)
# Score: 1763.5
#
#
#=======================================
BSNT_00101___ 1 ATGACGCTGACCACACAATTCTATACAATGCTGGCGATGTCCGGTATGGG 50
||||||||||||||.|||||.|||||.||||||||.|||.||||||||||
RBAM_000700__ 1 ATGACGCTGACCACCCAATTTTATACGATGCTGGCAATGACCGGTATGGG 50
BSNT_00101___ 51 TCTCTGGCTTGGTGCTTCGCTTGATACATACCGGCTCTTTGTCATTCGTG 100
...||||||.||.||.|||||||||||||||.||||.|||||||..||||
RBAM_000700__ 51 CGCCTGGCTCGGAGCGTCGCTTGATACATACAGGCTGTTTGTCAGCCGTG 100
BSNT_00101___ 101 CCAAAACAGCCAGATGGCTATTATTTATTCATGATATTCTTTTCTGGATT 150
|||||||.|||||||||||.|||||.||||||||.|||||.||.||||||
RBAM_000700__ 101 CCAAAACGGCCAGATGGCTGTTATTCATTCATGACATTCTCTTTTGGATT 150
BSNT_00101___ 151 GTGCAAGGGCTGCTTTTCTTTTATGTCTTGCTTCATGTAAATGAGGGAGA 200
||.|||||.|||||.||.||.|||||..||||..|.||.|||||.|||||
RBAM_000700__ 151 GTACAAGGTCTGCTGTTTTTCTATGTGCTGCTCAACGTGAATGAAGGAGA 200
BSNT_00101___ 201 ATTCAGGATTTACATCTTTTTAGCGGTTCTGCTGGGCGTTGCGACGTATC 250
|.|||||.|.|||||.||.||.||.||..|.|||||..||||||||||.|
RBAM_000700__ 201 ACTCAGGGTATACATTTTCTTGGCTGTCTTACTGGGGATTGCGACGTACC 250
BSNT_00101___ 251 AGAGCCTTTGCAAACGAATCTATATAAAAATACTGAAATTCGTCATTTAC 300
|.|||||.|..||||||||.||||||||||||||||||||.|.||||.|.
RBAM_000700__ 251 AAAGCCTGTTTAAACGAATGTATATAAAAATACTGAAATTTGCCATTCAT 300
BSNT_00101___ 301 CTTGTTGTTTCTGTTTATCAATTCTTCAAAAAA-CTCATTCAGCACGTGT 349
||||..||.|||.||||.|||||| .||||||| |||||||||||||||.
RBAM_000700__ 301 CTTGCGGTGTCTCTTTACCAATTC-GCAAAAAAGCTCATTCAGCACGTGC 349
BSNT_00101___ 350 TATTTCGTCCTATTGTGTGGACATGC----GGAGC-GATCATCTGGCTG- 393
|.||.||||| .|||....||| ..||| |.|||||.|||||
RBAM_000700__ 350 TGTTCCGTCC-----GGTGCTTCTGCTCTTTAAGCTGCTCATCGGGCTGA 394
BSNT_00101___ 394 --GCGGCATT-TTTATTCAAGAAAACATACAGCCTGATAGG--------- 431
.||| || |||.|| .|||| .||| ||.||
RBAM_000700__ 395 TCACGG--TTGTTTCTT--------TATAC-TCCT-ATCGGGTGAGTGCC 432
BSNT_00101___ 432 TTTTCTCCTGCTGTGTCTATATAAAATAGTCATGGTTCTG---------- 471
||||.|.| |..||||||.|.|||.||.||.|.|.||.||
RBAM_000700__ 433 TTTTTTGC-GAAGTGTCTTTTTAAGATCGTAACGTTTTTGCTGTATCCGC 481
BSNT_00101___ 472 TGTTTTCCGATCC-GTTTTATCGCGAAACAATGTTTGAAACTTCTTCCTG 520
|||||| ||| ||| ||||||||..||||||||||||||
RBAM_000700__ 482 TGTTTT----TCCTGTT-------GAAACAATTATTGAAACTTCTTCC-- 518
BSNT_00101___ 521 TGAAAA--TGCGTCTAACTTTTAGACGTTATTTTGAAAAAGGTGCAGGAT 568
|||||| .||||||.|||||.|.|||.||||||.|||||.|||||||||
RBAM_000700__ 519 TGAAAAGTGGCGTCTTACTTTCAAACGATATTTTCAAAAAAGTGCAGGAT 568
BSNT_00101___ 569 TTCTCAAAAAGAAGAAGAAACTATTGATAACCATAAGAACGACCATTACA 618
||.|..||||||..|||||||||.|.|||||.||.|||.|||||||.|.|
RBAM_000700__ 569 TTTTACAAAAGAGCAAGAAACTAATCATAACAATCAGATCGACCATGATA 618
BSNT_00101___ 619 CGGTTTTTGAAGAAATGA 636
||..|||||||.|..|||
RBAM_000700__ 619 CGTATTTTGAAAAGGTGA 636
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