Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00100 and RBAM_000690

See Amino acid alignment / Visit BSNT_00100 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence dna-align/BSNT_00100___yabP.1.9828.seq
#    -bsequence dna-align/RBAM_000690___yabP.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00100___yabP-RBAM_000690___yabP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00100___yabP-RBAM_000690___yabP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00100___yabP
# 2: RBAM_000690___yabP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     271/303 (89.4%)
# Similarity:   271/303 (89.4%)
# Gaps:           0/303 ( 0.0%)
# Score: 1227.0
# 
#
#=======================================

BSNT_00100___      1 ATGAATTCATATTATGATCAAAAAGGTTCTTCGTCTGTTCCGGAACAGCA     50
                     |||||||||||||||||.||||||||||||||.|||||||||||||||||
RBAM_000690__      1 ATGAATTCATATTATGAGCAAAAAGGTTCTTCTTCTGTTCCGGAACAGCA     50

BSNT_00100___     51 TGATGTGACAATGAAAGGCCGGAAGCATTTAGATATTTCTGGGGTTAAGC    100
                     ||||||.||.||||||||..|.|||||||||||.|||||.||.||.||||
RBAM_000690__     51 TGATGTAACGATGAAAGGGAGAAAGCATTTAGACATTTCGGGCGTCAAGC    100

BSNT_00100___    101 ATGTGGAGAGTTTTGATAACGAAGAATTCCTGCTGGAAACGGTGATGGGA    150
                     ||||.||.||||||||.||||||||.||..|||||||||||||.||||||
RBAM_000690__    101 ATGTAGAAAGTTTTGACAACGAAGAGTTTTTGCTGGAAACGGTTATGGGA    150

BSNT_00100___    151 ATGCTCTCCGTCAGAGGCCAAAACCTGCAGATGAAAAATCTTGATGTGGA    200
                     |||||.||||||||||||.|.|||||||||||||||||||||||||||||
RBAM_000690__    151 ATGCTTTCCGTCAGAGGCGAGAACCTGCAGATGAAAAATCTTGATGTGGA    200

BSNT_00100___    201 AAAAGGGATTGTTTCGATTAAAGGCAGGGTATTTGATTTAGTGTACTTAG    250
                     ||||||||||||.||.||.|||||||||||.|||||..|.||.||.||||
RBAM_000690__    201 AAAAGGGATTGTATCTATAAAAGGCAGGGTGTTTGACCTTGTATATTTAG    250

BSNT_00100___    251 ACGAACAACAAGGGGATAAAGCTAAAGGGTTTTTTAGCAAGTTGTTTAAA    300
                     ||||.||.||||||||||||||||||||||||||||||||||||||||||
RBAM_000690__    251 ACGAGCAGCAAGGGGATAAAGCTAAAGGGTTTTTTAGCAAGTTGTTTAAA    300

BSNT_00100___    301 TGA    303
                     |||
RBAM_000690__    301 TGA    303


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