Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00098 and RBAM_000680
See
Amino acid alignment /
Visit
BSNT_00098 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:53
# Commandline: needle
# -asequence dna-align/BSNT_00098___yabO.1.9828.seq
# -bsequence dna-align/RBAM_000680___yabO.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00098___yabO-RBAM_000680___yabO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00098___yabO-RBAM_000680___yabO.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00098___yabO
# 2: RBAM_000680___yabO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity: 205/261 (78.5%)
# Similarity: 205/261 (78.5%)
# Gaps: 0/261 ( 0.0%)
# Score: 801.0
#
#
#=======================================
BSNT_00098___ 1 ATGAGATTAGATAAATTTTTGAAGGTATCACGGCTGATCAAACGGCGTAC 50
||||||.|.|||||.|||||.||.|||||..|..|.||.|||||.||.||
RBAM_000680__ 1 ATGAGACTTGATAAGTTTTTAAAAGTATCCAGATTAATTAAACGCCGCAC 50
BSNT_00098___ 51 ACTAGCGAAGGAAGTAGCTGACCAAGGACGAATCTCTATTAACGGAAACC 100
|.|.|||||.||.||.||.||.|||||..|||||.|..|||||||.||.|
RBAM_000680__ 51 ATTGGCGAAAGAGGTCGCCGATCAAGGGAGAATCACAGTTAACGGGAATC 100
BSNT_00098___ 101 AAGCTAAAGCTAGCTCTGACGTAAAACCGGGAGATGAACTAACGGTCCGC 150
|.||.|||||.|||||.|||||||||.|.||.||||||||.|||||||||
RBAM_000680__ 101 AGGCGAAAGCCAGCTCAGACGTAAAAGCCGGTGATGAACTGACGGTCCGC 150
BSNT_00098___ 151 TTCGGCCAAAAGCTTGTAACGGTTCAAGTTAATGAATTGAAAGACACGAC 200
||||||||.||.|||||.||.||..|.||.||.|||||||||||.||.||
RBAM_000680__ 151 TTCGGCCAGAAACTTGTCACCGTGAAGGTAAACGAATTGAAAGAAACAAC 200
BSNT_00098___ 201 GAAAAAAGAAGAAGCTGCAAACATGTACACGATTCTAAAAGAAGAAAAAC 250
|||||||||||||||.||...||||||.||.||..|.||.||||||||||
RBAM_000680__ 201 GAAAAAAGAAGAAGCCGCGGGCATGTATACAATCGTCAAGGAAGAAAAAC 250
BSNT_00098___ 251 TCGGCGAATAG 261
|||||||||||
RBAM_000680__ 251 TCGGCGAATAG 261
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.