Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00098 and RBAM_000680

See Amino acid alignment / Visit BSNT_00098 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence dna-align/BSNT_00098___yabO.1.9828.seq
#    -bsequence dna-align/RBAM_000680___yabO.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00098___yabO-RBAM_000680___yabO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00098___yabO-RBAM_000680___yabO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00098___yabO
# 2: RBAM_000680___yabO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     205/261 (78.5%)
# Similarity:   205/261 (78.5%)
# Gaps:           0/261 ( 0.0%)
# Score: 801.0
# 
#
#=======================================

BSNT_00098___      1 ATGAGATTAGATAAATTTTTGAAGGTATCACGGCTGATCAAACGGCGTAC     50
                     ||||||.|.|||||.|||||.||.|||||..|..|.||.|||||.||.||
RBAM_000680__      1 ATGAGACTTGATAAGTTTTTAAAAGTATCCAGATTAATTAAACGCCGCAC     50

BSNT_00098___     51 ACTAGCGAAGGAAGTAGCTGACCAAGGACGAATCTCTATTAACGGAAACC    100
                     |.|.|||||.||.||.||.||.|||||..|||||.|..|||||||.||.|
RBAM_000680__     51 ATTGGCGAAAGAGGTCGCCGATCAAGGGAGAATCACAGTTAACGGGAATC    100

BSNT_00098___    101 AAGCTAAAGCTAGCTCTGACGTAAAACCGGGAGATGAACTAACGGTCCGC    150
                     |.||.|||||.|||||.|||||||||.|.||.||||||||.|||||||||
RBAM_000680__    101 AGGCGAAAGCCAGCTCAGACGTAAAAGCCGGTGATGAACTGACGGTCCGC    150

BSNT_00098___    151 TTCGGCCAAAAGCTTGTAACGGTTCAAGTTAATGAATTGAAAGACACGAC    200
                     ||||||||.||.|||||.||.||..|.||.||.|||||||||||.||.||
RBAM_000680__    151 TTCGGCCAGAAACTTGTCACCGTGAAGGTAAACGAATTGAAAGAAACAAC    200

BSNT_00098___    201 GAAAAAAGAAGAAGCTGCAAACATGTACACGATTCTAAAAGAAGAAAAAC    250
                     |||||||||||||||.||...||||||.||.||..|.||.||||||||||
RBAM_000680__    201 GAAAAAAGAAGAAGCCGCGGGCATGTATACAATCGTCAAGGAAGAAAAAC    250

BSNT_00098___    251 TCGGCGAATAG    261
                     |||||||||||
RBAM_000680__    251 TCGGCGAATAG    261


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