Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00095 and RBAM_000650

See Amino acid alignment / Visit BSNT_00095 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:53
# Commandline: needle
#    -asequence dna-align/BSNT_00095___spoVT.1.9828.seq
#    -bsequence dna-align/RBAM_000650___spoVT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00095___spoVT-RBAM_000650___spoVT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00095___spoVT-RBAM_000650___spoVT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00095___spoVT
# 2: RBAM_000650___spoVT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 538
# Identity:     429/538 (79.7%)
# Similarity:   429/538 (79.7%)
# Gaps:           2/538 ( 0.4%)
# Score: 1697.0
# 
#
#=======================================

BSNT_00095___      1 ATGAAAGCAACCGGTATCGTACGTCGTATTGATGACTTAGGCCGGGTCGT     50
                     ||||||||.||.|||||||||||||||||||||||..||||.||||||||
RBAM_000650__      1 ATGAAAGCTACAGGTATCGTACGTCGTATTGATGATCTAGGACGGGTCGT     50

BSNT_00095___     51 GATTCCTAAAGAAATTCGAAGAACTCTGAGAATCAGGGAAGGCGATCCGC    100
                     .|||||||||||||||||.|||||.|||.|||||||||||||.||.||||
RBAM_000650__     51 CATTCCTAAAGAAATTCGGAGAACACTGCGAATCAGGGAAGGAGACCCGC    100

BSNT_00095___    101 TTGAGATTTTTGTAGATCGTGACGGAGAAGTGATTTTGAAAAAGTATTCA    150
                     ||||.||.||.||.||.||.|||||||||||.||.||||||||.|||||.
RBAM_000650__    101 TTGAAATATTCGTTGACCGCGACGGAGAAGTTATATTGAAAAAATATTCT    150

BSNT_00095___    151 CCGATCAGTGAGCTTGGAGACTTTGCAAAGGAGTATGCAGACGCGCTTTA    200
                     ||.||||||||||||||.||.|||||.|||||.||||||||.||..|.||
RBAM_000650__    151 CCTATCAGTGAGCTTGGCGATTTTGCGAAGGAATATGCAGATGCTTTGTA    200

BSNT_00095___    201 CGACAGCCTCGGCCATTCAGTGCTGATTTGTGATCGTGATGTATATATTG    250
                     .|||||.|||||||||||.||..|||||||.||.|||||.|..|||||||
RBAM_000650__    201 TGACAGTCTCGGCCATTCCGTCTTGATTTGCGACCGTGACGCGTATATTG    250

BSNT_00095___    251 CCGTGTCCGGCAGCTCCAAAAAAG-ATTACTTAAACAAGTCAATCAGTGA    299
                     ||||.||.|||||.||.||||||| |||.| |.|||||..|.|||||.||
RBAM_000650__    251 CCGTTTCAGGCAGTTCGAAAAAAGAATTTC-TGAACAAAGCCATCAGCGA    299

BSNT_00095___    300 AATGCTGGAAAGAACAATGGATCAGCGCAGCTCCGTGCTTGAGAGTGATG    349
                     ..||||.||||.|||.|||||||||||||||||.|||.|.||.|..||.|
RBAM_000650__    300 TTTGCTCGAAAAAACGATGGATCAGCGCAGCTCAGTGGTAGAAAACGACG    349

BSNT_00095___    350 CGAAATCAGTACAGCTTGTGAATGGAATTGATGAGGACATGAATTCTTAT    399
                     .|||.||.|..||||||||.||||..||||||||.||.||||..||.|||
RBAM_000650__    350 TGAAGTCCGCGCAGCTTGTTAATGACATTGATGAAGATATGAGCTCCTAT    399

BSNT_00095___    400 ACTGTCGGCCCAATTGTGGCGAACGGTGATCCGATAGGTGCTGTGGTGAT    449
                     ||..|.|..||.||.|||||.||.||.|||||.||.|||||.|||||.||
RBAM_000650__    400 ACAATAGCTCCGATCGTGGCAAATGGCGATCCTATCGGTGCCGTGGTCAT    449

BSNT_00095___    450 CTTTTCAAAAGACCAGACAATGGGCGAAGTAGAGCATAAAGCCGTTGAAA    499
                     ||||||.||.||.|||.||.|.||.||||||||.||||||||.||.||||
RBAM_000650__    450 CTTTTCCAAGGAACAGGCACTTGGAGAAGTAGAACATAAAGCGGTAGAAA    499

BSNT_00095___    500 CAGCAGCTGGATTTTTGGCTCGTCAAATGGAACAGTAG    537
                     |.|||||..|.||||||||..|.||||||||.||||||
RBAM_000650__    500 CGGCAGCCAGTTTTTTGGCGAGACAAATGGAGCAGTAG    537


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