Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00091 and RBAM_000620

See Amino acid alignment / Visit BSNT_00091 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:52
# Commandline: needle
#    -asequence dna-align/BSNT_00091___spoVC.1.9828.seq
#    -bsequence dna-align/RBAM_000620___spoVC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00091___spoVC-RBAM_000620___spoVC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00091___spoVC-RBAM_000620___spoVC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00091___spoVC
# 2: RBAM_000620___spoVC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 568
# Identity:     447/568 (78.7%)
# Similarity:   447/568 (78.7%)
# Gaps:           2/568 ( 0.4%)
# Score: 1739.0
# 
#
#=======================================

BSNT_00091___      1 ATGCTTGTGATTGCCGGTCTCGGAAACCCGGGGAAGAACTATGAAAATAC     50
                     ||||||||||||||||||||.||.||||||||.||.|.|||.||.||.||
RBAM_000620__      1 ATGCTTGTGATTGCCGGTCTGGGTAACCCGGGAAAAACCTACGAGAACAC     50

BSNT_00091___     51 ACGGCATAATGTCGGATTTATGGTGATAGATCAGCTTGCAAAGGAATGGA    100
                     ..|.|||||||||||.|||||||..||.||..|||||.|.||.|||||||
RBAM_000620__     51 GAGACATAATGTCGGCTTTATGGCCATTGACGAGCTTTCTAAAGAATGGA    100

BSNT_00091___    101 ATATAGAGCTGAATCAAAATAAATTTAACGGATTATACGGAACCGGATTT    150
                     ||||.||..|||||.|||..|||||.||||||.|.|||||||..||.|||
RBAM_000620__    101 ATATTGAATTGAATAAAACGAAATTCAACGGACTTTACGGAATGGGGTTT    150

BSNT_00091___    151 GTTTCCGGCAAAAAGGTTCTACTTGTTAAACCGCTTACATATATGAATTT    200
                     ||||||||.|||||.|||||||||||||||||||||||||||||||||||
RBAM_000620__    151 GTTTCCGGAAAAAAAGTTCTACTTGTTAAACCGCTTACATATATGAATTT    200

BSNT_00091___    201 ATCAGGAGAATGTTTGCGGCCTTTAATGGACTACTATGATGTCGATAACG    250
                     ||||||.||||||||||||||..||.||||.||.|||||||.||||.|.|
RBAM_000620__    201 ATCAGGGGAATGTTTGCGGCCGATACTGGATTATTATGATGCCGATCATG    250

BSNT_00091___    251 AAGATTTGACAGTCATTTACGACGACCTTGACCTTCCTACTGGCAAGATC    300
                     |||||.|||.||||||.|||||.||||||||.|||||.||.||.||.|||
RBAM_000620__    251 AAGATCTGAAAGTCATATACGATGACCTTGATCTTCCGACGGGGAAAATC    300

BSNT_00091___    301 CGTTTAAGAACGAAAGGAAGCGCCGGAGGGCACAATGGCATCAAATCACT    350
                     .|..|..|.||||||||.|||||.||.||.||.||.||.||.|||||.||
RBAM_000620__    301 AGGCTCCGGACGAAAGGGAGCGCAGGCGGACATAACGGAATTAAATCGCT    350

BSNT_00091___    351 GATCCAGCATCTTGGTACATCCGAGTTTGACCGTATCCGCATCGGAATCG    400
                     .||.|||||.||.||.||..|.||.||||||||..||.|.||||||||||
RBAM_000620__    351 TATACAGCACCTCGGAACCCCTGAATTTGACCGGGTCAGAATCGGAATCG    400

BSNT_00091___    401 GCAGGCCTGTAAACGGCATGAAGGTCGTTGATTATGTGTTAGGCTCCTTT    450
                     ||.|.||.||.|||||.|||||.||||||||.|||||..|.||..|.|||
RBAM_000620__    401 GCCGCCCCGTCAACGGAATGAAAGTCGTTGACTATGTACTGGGAGCTTTT    450

BSNT_00091___    451 ACCAAGGAGGAGGCACCTGAGATCGAAGAAGCGGT-TGATAAATCTGTGA    499
                     ||.|||||.||.||.||..|.|||.|.||.||.|| |.| |||.|.||.|
RBAM_000620__    451 ACGAAGGAAGAAGCGCCGCATATCAATGATGCCGTCTCA-AAAACCGTAA    499

BSNT_00091___    500 AGGCTTGTGAGGCTTCTTTGAGTAAACCGTTTTTAGAAGTCATGAACGAA    549
                     |.||.||.||.|||||.||.|..|||||.|||||||||||||||||||||
RBAM_000620__    500 AAGCCTGCGAAGCTTCCTTAACGAAACCATTTTTAGAAGTCATGAACGAA    549

BSNT_00091___    550 TTTAACGCAAAGGTATAA    567
                     |||||.|||||.||||||
RBAM_000620__    550 TTTAATGCAAATGTATAA    567


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