Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00090 and RBAM_000610
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:52
# Commandline: needle
# -asequence dna-align/BSNT_00090___ctc.1.9828.seq
# -bsequence dna-align/RBAM_000610___ctc.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00090___ctc-RBAM_000610___ctc.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00090___ctc-RBAM_000610___ctc.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00090___ctc
# 2: RBAM_000610___ctc
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 632
# Identity: 450/632 (71.2%)
# Similarity: 450/632 (71.2%)
# Gaps: 40/632 ( 6.3%)
# Score: 1576.5
#
#
#=======================================
BSNT_00090___ 1 ATGGCAACTTTAACGGCAAAAGAAAGAACGGACTTTACTCGTTCGTCTCT 50
|||||||||||||..|||||.||||||||.||.||||..||||||.|.||
RBAM_000610__ 1 ATGGCAACTTTAAAAGCAAATGAAAGAACAGATTTTAAACGTTCGACGCT 50
BSNT_00090___ 51 TCGGAATATCCGTACTTCAGGACATGTTCCAGGTATCATATATGGGAAGG 100
||||||.||||||..||||||||||||||||||.||.|||||.||.||.|
RBAM_000610__ 51 TCGGAAAATCCGTCATTCAGGACATGTTCCAGGGATTATATACGGTAAAG 100
BSNT_00090___ 101 ATACGGGTAACAAA----CCTGTGTCATTAGACAGTGTGGAGCTCATCAA 146
|.| ||||.|| |||||.||.|||||||||||.||..|..|.||
RBAM_000610__ 101 AAA----TAACGAATACGCCTGTCTCTTTAGACAGTGTCGAATTGCTTAA 146
BSNT_00090___ 147 AACGCTGAGGGACGAAGGCAAAAATGCAGTCATTACGCTTGAGGTCAGCG 196
|||..||.||||||||||.|||||..|..|.||.||..||||.||||.||
RBAM_000610__ 147 AACATTGCGGGACGAAGGAAAAAACACGATTATCACAATTGATGTCAACG 196
BSNT_00090___ 197 GAGAAAAACACTCAGTCATGGTAACAGACCTGCAGACGGACCCGCTGAAA 246
||.|..|.||.||.||.|||||.||.||.||.|||||.||||||||.|||
RBAM_000610__ 197 GAAATCAGCAATCGGTTATGGTGACTGATCTTCAGACAGACCCGCTCAAA 246
BSNT_00090___ 247 AATGAAATCACTCATGCTGATTTTCAAGTAGTTAATATGAGTGAGGACAT 296
||.|||.|.||.||.||.|||||||||||.||.||||||||||||||..|
RBAM_000610__ 247 AACGAATTGACGCACGCCGATTTTCAAGTCGTGAATATGAGTGAGGAGCT 296
BSNT_00090___ 297 TGAAGTGGAAGTTCCGATTCATCTGACCGGAGAAGCCATTGGAGTGAAAA 346
.||.|..||.||.||||||||.|||||.|||||.||.|..|||||.|||.
RBAM_000610__ 297 GGAGGCCGAGGTGCCGATTCAGCTGACGGGAGAGGCGAAGGGAGTCAAAG 346
BSNT_00090___ 347 ACGGAGGCGTACTGCAGCAGCCGTTATATGCACTTACTGTAAAGGCCAAG 396
||||||||||..|.|||||||||.|..|||..|||.|..|.|||||.|||
RBAM_000610__ 347 ACGGAGGCGTCATCCAGCAGCCGCTGCATGAGCTTTCGATTAAGGCTAAG 396
BSNT_00090___ 397 CCAAAAGCCATTCCGCAAACGATTGAGGCTGATATTTCAAGCCTCGATGT 446
||.||.|.|||.||.||.||.||..|.|.|||||||||..|.||.||..|
RBAM_000610__ 397 CCGAAGGACATCCCTCAGACAATCAATGTTGATATTTCCGGGCTTGAAAT 446
BSNT_00090___ 447 AAATGAAGTACTGACGATTGCGGATTTGCCTGCTGGCGGTGACTACTCCT 496
.|||||.||.|||||.||.||.|||.||.||||||.|||..|.||..|.|
RBAM_000610__ 447 GAATGATGTGCTGACCATCGCAGATCTGACTGCTGACGGCAATTATACAT 496
BSNT_00090___ 497 TTAATCATGAGTCAGATGAGGTTGTGGCTTCAATCCTTCCTCCGCAGCAG 546
|||...|.||..|.||.||.||.||||||||.||||||||||| ..||
RBAM_000610__ 497 TTACAAACGATCCGGAAGAAGTCGTGGCTTCCATCCTTCCTCC---TAAG 543
BSNT_00090___ 547 CAGGAAGCAGCTGAGGTCGATGAAGAGGAATCTGCCGA----TGCTC--- 589
||||||||| .||||.||||| |||.|| | |||
RBAM_000610__ 544 CAGGAAGCA------TTCGAAGAAGA------TGCAGAACCGT-CTCCTG 580
BSNT_00090___ 590 ------AGCCAGAAGGTGAAAACGAACAATAA 615
||||.|||||.|||| |.||||||
RBAM_000610__ 581 GGGAAGAGCCCGAAGGAGAAA---ATCAATAA 609
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