Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00088 and RBAM_000600
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:52
# Commandline: needle
# -asequence dna-align/BSNT_00088___prs.1.9828.seq
# -bsequence dna-align/RBAM_000600___prs.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00088___prs-RBAM_000600___prs.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00088___prs-RBAM_000600___prs.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00088___prs
# 2: RBAM_000600___prs
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 955
# Identity: 806/955 (84.4%)
# Similarity: 806/955 (84.4%)
# Gaps: 2/955 ( 0.2%)
# Score: 3422.0
#
#
#=======================================
BSNT_00088___ 1 ATGTCTAATCAATACGGAGATAAGAATTTAAAGATTTTTTCTTTGAATTC 50
||||||||..||||||||||||||||||||||||||||||||||||||||
RBAM_000600__ 1 ATGTCTAACGAATACGGAGATAAGAATTTAAAGATTTTTTCTTTGAATTC 50
BSNT_00088___ 51 GAATCCAGAGCTTGCAAAAGAAATCGCAGATATAGTTGGAGTTCAATTAG 100
.||||||||.|||||||||||||||||.||||..||.||.||||||||||
RBAM_000600__ 51 AAATCCAGAACTTGCAAAAGAAATCGCGGATAATGTAGGGGTTCAATTAG 100
BSNT_00088___ 101 GGAAATGTTCTGTCACAAGATTTAGTGACGGGGAAGTCCAAATTAATATC 150
|.||.||.|||||.||||||||.||||||||.||.|||||.||.||.||.
RBAM_000600__ 101 GAAAGTGCTCTGTTACAAGATTCAGTGACGGAGAGGTCCAGATCAACATA 150
BSNT_00088___ 151 GAAGAAAGTATTCGCGGATGTGATTGTTACATCATCCAGTCTACAAGTGA 200
|||||||||||||||||.||||||||.||.|||||.|||||||||||||.
RBAM_000600__ 151 GAAGAAAGTATTCGCGGCTGTGATTGCTATATCATTCAGTCTACAAGTGC 200
BSNT_00088___ 201 CCCCGTTAACGAGCATATTATGGAACTGCTGATTATGGTAGATGCGTTAA 250
.||.||.||||||||.||.||||||.|||||||||||||.||.||.||||
RBAM_000600__ 201 GCCGGTCAACGAGCACATCATGGAATTGCTGATTATGGTTGACGCTTTAA 250
BSNT_00088___ 251 AACGCGCTTCTGCAAAAACGATTAACATTGTTATTCCTTATTACGGTTAT 300
|.||||||||.||.|||||.||.||||||||.|||||.||.|||||||||
RBAM_000600__ 251 AGCGCGCTTCCGCGAAAACAATCAACATTGTCATTCCGTACTACGGTTAT 300
BSNT_00088___ 301 GCGCGTCAAGACAGAAAAGCAAGATCCCGTGAGCCAATCACAGCTAAACT 350
|||||.||.|||||||||||||||||.|||||.||.||.||.||.|||||
RBAM_000600__ 301 GCGCGCCAGGACAGAAAAGCAAGATCACGTGAACCGATTACGGCAAAACT 350
BSNT_00088___ 351 TTTCGCTAACCTGCTTGAAACAGCCGGTGCGACTCGTGTGATTGCACTTG 400
|||.||.|||||||||||||||||.||||||||.||.|||||.||.||||
RBAM_000600__ 351 TTTTGCAAACCTGCTTGAAACAGCGGGTGCGACACGCGTGATCGCGCTTG 400
BSNT_00088___ 401 ACCTGCATGCGCCGCAAATTCAAGGATTCTTTGATATACCGATTGACCAC 450
|..|.||.|||||||||||||||||.|||||||||||.||||||||||||
RBAM_000600__ 401 ATTTACACGCGCCGCAAATTCAAGGTTTCTTTGATATTCCGATTGACCAC 450
BSNT_00088___ 451 TTAATGGGTGTTCCGATTTTAGGAGAATATTTTGAAGGCAAAAATCTTG- 499
|||||||||||||||||||||||..|.||.||||||||.|||.| ||||
RBAM_000600__ 451 TTAATGGGTGTTCCGATTTTAGGCCATTACTTTGAAGGTAAAGA-CTTGA 499
BSNT_00088___ 500 AAGATATCGTCATTGTTTCACCAGACCATGGCGGTGTGACACGTGCCCGC 549
||||||||||.||||||||.||.|||||.|||||||||||.||.||||||
RBAM_000600__ 500 AAGATATCGTTATTGTTTCTCCTGACCACGGCGGTGTGACGCGCGCCCGC 549
BSNT_00088___ 550 AAACTGGCTGACCGACTAAAAGCGCCAATTGCGATTATCGATAAACGCCG 599
|||||.||.|||||.||.||||||||.||.|||||||||||.||||||||
RBAM_000600__ 550 AAACTTGCGGACCGTCTGAAAGCGCCGATCGCGATTATCGACAAACGCCG 599
BSNT_00088___ 600 TCCGCGTCCAAACGTGGCGGAAGTCATGAATATTGTAGGTAACATCGAAG 649
|||..|.||.||.|.||..|||||.|||||.||.||.||||||.|.||||
RBAM_000600__ 600 TCCTAGACCGAATGAGGTAGAAGTGATGAACATCGTCGGTAACGTGGAAG 649
BSNT_00088___ 650 GGAAGACTGCTATCCTCATCGATGACATTATTGATACTGCAGGTACGATT 699
|.||.||.||.||.||.||||||||.|||||||||||.||.||.||.||.
RBAM_000600__ 650 GTAAAACAGCGATTCTGATCGATGATATTATTGATACGGCCGGCACAATC 699
BSNT_00088___ 700 ACACTTGCTGCTAATGCGCTCGTTGAAAACGGAGCGAAAGAAGTATATGC 749
||||||||.|||||.|||||.||||||||||||||...||||||.|||||
RBAM_000600__ 700 ACACTTGCCGCTAACGCGCTGGTTGAAAACGGAGCTGCAGAAGTGTATGC 749
BSNT_00088___ 750 ATGCTGTACACACCCTGTACTATCAGGCCCTGCGGTAGAACGGATTAATA 799
|||||||||.|||||||||||.|||||||||||.||.||.|||||.||||
RBAM_000600__ 750 ATGCTGTACGCACCCTGTACTGTCAGGCCCTGCCGTTGAGCGGATCAATA 799
BSNT_00088___ 800 ATTCAACAATTAAAGAGCTTGTTGTGACAAACAGCATCAAGCTTCCCGAA 849
|.||.|.|||.||.||||||||.||.||.||||||||.||.|||||.||.
RBAM_000600__ 800 ACTCTAAAATCAAGGAGCTTGTCGTAACGAACAGCATTAAACTTCCTGAT 849
BSNT_00088___ 850 GAAAAGAAAATTGAACGCTTTAGGCAGCTTTCAGTCGGACCGCTTCTGGC 899
||.||.|||||.||||||||||.|||||||||.|||||||||||||||||
RBAM_000600__ 850 GAGAAAAAAATCGAACGCTTTAAGCAGCTTTCTGTCGGACCGCTTCTGGC 899
BSNT_00088___ 900 AGAAGCAATTATTCGCGTTCATGAGCAGCAATCAGTCAGCTATCTGTTCA 949
.|||||.|||||.||||||||.|||.|.|||||.|||||||||.|.||||
RBAM_000600__ 900 TGAAGCGATTATCCGCGTTCACGAGAAACAATCTGTCAGCTATTTATTCA 949
BSNT_00088___ 950 GCTAA 954
|||||
RBAM_000600__ 950 GCTAA 954
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