Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00083 and RBAM_000560

See Amino acid alignment / Visit BSNT_00083 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence dna-align/BSNT_00083___purR.1.9828.seq
#    -bsequence dna-align/RBAM_000560___purR.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00083___purR-RBAM_000560___purR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00083___purR-RBAM_000560___purR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00083___purR
# 2: RBAM_000560___purR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 858
# Identity:     729/858 (85.0%)
# Similarity:   729/858 (85.0%)
# Gaps:           0/858 ( 0.0%)
# Score: 3129.0
# 
#
#=======================================

BSNT_00083___      1 ATGAAGTTTCGTCGCAGCGGCAGATTGGTGGACTTAACAAATTATTTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000560__      1 ATGAAGTTTCGTCGCAGCGGCAGATTGGTGGACTTAACAAATTATTTGTT     50

BSNT_00083___     51 AACCCATCCGCACGAGTTAATACCGCTAACCTTTTTCTCTGAGCGGTATG    100
                     ||||||||||||.||.|||||||||.||||.||||||||.||.||||||.
RBAM_000560__     51 AACCCATCCGCATGAATTAATACCGTTAACGTTTTTCTCAGAACGGTATC    100

BSNT_00083___    101 AATCTGCAAAATCATCGATCAGTGAAGATTTAACAATTATTAAACAAACC    150
                     ||||.|||||.|||||.|||||||||||||||||.|||||||||||.|||
RBAM_000560__    101 AATCAGCAAAGTCATCAATCAGTGAAGATTTAACGATTATTAAACAGACC    150

BSNT_00083___    151 TTTGAACAGCAGGGGATTGGTACTTTGCTTACTGTTCCCGGAGCTGCCGG    200
                     |||||||||||.||.|||||.||..|||||||.||.||.|||||||||||
RBAM_000560__    151 TTTGAACAGCAAGGCATTGGGACGCTGCTTACAGTGCCGGGAGCTGCCGG    200

BSNT_00083___    201 AGGCGTTAAATATATTCCGAAAATGAAGCAGGCTGAAGCTGAAGAGTTTG    250
                     ||||||.|||||.|||||||||.||||.|||||||||||.||||..|||.
RBAM_000560__    201 AGGCGTCAAATACATTCCGAAAGTGAAACAGGCTGAAGCAGAAGCCTTTA    250

BSNT_00083___    251 TGCAGACACTTGGACAGTCGCTGGCAAATCCTGAGCGTATCCTTCCGGGC    300
                     |.|||...||.||||||||..|.|.|||||||||||||||||||||||||
RBAM_000560__    251 TACAGGAGCTGGGACAGTCTTTAGTAAATCCTGAGCGTATCCTTCCGGGC    300

BSNT_00083___    301 GGTTATGTATATTTAACGGATATCTTAGGAAAGCCATCTGTACTCTCCAA    350
                     ||||||||||||||||||||||||||||||||.||||||||.|||||..|
RBAM_000560__    301 GGTTATGTATATTTAACGGATATCTTAGGAAAACCATCTGTCCTCTCTCA    350

BSNT_00083___    351 GGTAGGGAAGCTGTTTGCTTCCGTGTTTGCAGAGCGCGAAATTGATGTTG    400
                     .|||||.|.|||.|||||||||||.|||||.|||||.||.||||||||.|
RBAM_000560__    351 TGTAGGCAGGCTTTTTGCTTCCGTTTTTGCGGAGCGGGAGATTGATGTGG    400

BSNT_00083___    401 TCATGACCGTTGCCACGAAAGGCATCCCTCTTGCGTATGCAGCTGCAAGT    450
                     |.|||||||||||.||.|||||.|||||||||||.||.|||||.||.|||
RBAM_000560__    401 TGATGACCGTTGCGACAAAAGGAATCCCTCTTGCTTACGCAGCGGCCAGT    450

BSNT_00083___    451 TATTTGAATGTACCTGTTGTGATCGTTCGTAAAGACAATAAGGTAACAGA    500
                     |||.||||.||.||.|||||.|||||.||.||||||||||||||.||.||
RBAM_000560__    451 TATCTGAACGTTCCGGTTGTCATCGTGCGAAAAGACAATAAGGTGACGGA    500

BSNT_00083___    501 GGGCTCCACAGTCAGCATTAATTACGTTTCAGGCTCCTCAAACCGCATTC    550
                     .||||||||.||.|||||.|||||.||.|||||.||.||.||||||||||
RBAM_000560__    501 AGGCTCCACGGTGAGCATCAATTATGTATCAGGGTCGTCTAACCGCATTC    550

BSNT_00083___    551 AAACAATGTCACTTGCGAAAAGAAGCATGAAAACGGGGTCAAACGTACTC    600
                     ||||.|||||.||||||||||||||..||...|||||.||.|||||..|.
RBAM_000560__    551 AAACGATGTCGCTTGCGAAAAGAAGTTTGGCTACGGGTTCGAACGTTTTG    600

BSNT_00083___    601 ATTATTGATGACTTTATGAAAGCAGGCGGCACCATTAATGGTATGATTAA    650
                     ||||||||.||.|||||||||||.||||||||||||||.||.|||||.|.
RBAM_000560__    601 ATTATTGACGATTTTATGAAAGCCGGCGGCACCATTAACGGCATGATCAG    650

BSNT_00083___    651 TCTGTTGGATGAGTTTAACGCAAATGTGGCGGGAATCGGCGTCTTAGTTG    700
                     .|||.|.|||||||||||||||||.||.||||||||.||||||||.||||
RBAM_000560__    651 CCTGCTTGATGAGTTTAACGCAAACGTTGCGGGAATAGGCGTCTTGGTTG    700

BSNT_00083___    701 AAGCCGAAGGAGTAGATGAACGTCTTGTTGACGAATATATGTCACTTCTT    750
                     |||||||.|||||..|||||||.|||||.||.|||||.||||||||.||.
RBAM_000560__    701 AAGCCGAGGGAGTGAATGAACGGCTTGTCGATGAATACATGTCACTGCTC    750

BSNT_00083___    751 ACTCTTTCAACCATCAACATGAAAGAGAAGTCCATTGAAATTCAGAATGG    800
                     ||.||||||||||||||.||||||||.||..|.|||||.|||||.||.||
RBAM_000560__    751 ACGCTTTCAACCATCAATATGAAAGACAAAACGATTGAGATTCAAAACGG    800

BSNT_00083___    801 CAATTTTCTGCGTTTTCTTAAAGACAATCTTTTAAAGAATGGAGAGACAG    850
                     ||||||||||||.|||.|||||||..|.|.||||||||||||.|||||||
RBAM_000560__    801 CAATTTTCTGCGATTTTTTAAAGAACAGCATTTAAAGAATGGGGAGACAG    850

BSNT_00083___    851 AATCATGA    858
                     ||..||||
RBAM_000560__    851 AAAAATGA    858


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00083 and RBAM_000560

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
