Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00080 and RBAM_000530

See Amino acid alignment / Visit BSNT_00080 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:51
# Commandline: needle
#    -asequence dna-align/BSNT_00080___veg.1.9828.seq
#    -bsequence dna-align/RBAM_000530___veg.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00080___veg-RBAM_000530___veg.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00080___veg-RBAM_000530___veg.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00080___veg
# 2: RBAM_000530___veg
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 261
# Identity:     248/261 (95.0%)
# Similarity:   248/261 (95.0%)
# Gaps:           0/261 ( 0.0%)
# Score: 1188.0
# 
#
#=======================================

BSNT_00080___      1 ATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGG     50
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
RBAM_000530__      1 ATGGCGAAGACGTTGTCCGATATAAAAAGATCGCTTGATGGGAATTTAGG     50

BSNT_00080___     51 TAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGC    100
                     ||||.||||.|||||||||||||||||.||||||||||||||||||||||
RBAM_000530__     51 TAAACGGCTTACGTTAAAAGCAAACGGCGGCCGCCGAAAAACGATTGAGC    100

BSNT_00080___    101 GTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000530__    101 GTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTA    150

BSNT_00080___    151 GATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
RBAM_000530__    151 GATCAAGACGAGAATTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAT    200

BSNT_00080___    201 TTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAG    250
                     |.||||||||||||||||..|||||||.|||||.||.||.||||||||||
RBAM_000530__    201 TCTGACTGAGACTGTTGAATTGACATTCAATGACGATGCGGCAAGCTCAG    250

BSNT_00080___    251 TGGCATTTTAA    261
                     |.|||||||||
RBAM_000530__    251 TAGCATTTTAA    261


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