Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00075 and RBAM_000490
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence dna-align/BSNT_00075___yabE.1.9828.seq
# -bsequence dna-align/RBAM_000490___yabE.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00075___yabE-RBAM_000490___yabE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00075___yabE-RBAM_000490___yabE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00075___yabE
# 2: RBAM_000490___yabE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1411
# Identity: 1033/1411 (73.2%)
# Similarity: 1033/1411 (73.2%)
# Gaps: 146/1411 (10.3%)
# Score: 3893.5
#
#
#=======================================
BSNT_00075___ 1 -----------------------------TT---------GGGA------ 6
|| ||||
RBAM_000490__ 1 ATGTCTCTCTTCCTTTTTTTGCTTTGTTTTTGCATAATGAGGGATACGCT 50
BSNT_00075___ 7 GAA-------------AGAGAAGGGAGGGTTGACAGCCTTTTAGATACTC 43
||| .||||.|||||||||||||||.||||||||||||
RBAM_000490__ 51 GAAGGTTTTTCATCTTCGAGATGGGAGGGTTGACAGCATTTTAGATACTC 100
BSNT_00075___ 44 TATATAATCTCTCCGAGGAGAAGGAGGCGTTTTTCATCACACAAAAAATG 93
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000490__ 101 TATATAATCTCTCCGAGGAGAAGGAGGCGTTTTTCATCACACAAAAAATG 150
BSNT_00075___ 94 AAAAAGCTGTTTTCCGTAAAGCTTAGCAAAAGCAAAGTCATTCTGGTTGC 143
|||||.||||||||||||||||||.|.||||||||.||.|||||..||||
RBAM_000490__ 151 AAAAAACTGTTTTCCGTAAAGCTTGGTAAAAGCAAGGTTATTCTTATTGC 200
BSNT_00075___ 144 TGCTTGTTTGCTTTTGGCAGGAAGCGGGACTGCGTACGCGGCTCATGAGC 193
.|||..|.|.||..|||..||||.|||||||||.||||.|||.|||||||
RBAM_000490__ 201 AGCTATTATTCTGCTGGGCGGAACCGGGACTGCATACGGGGCACATGAGC 250
BSNT_00075___ 194 TGACGAAACAATCAGTCTCAGTTTCTATCAATGGCAAAAAGAAACATATA 243
|..|.|||||||||||.||.|||||||||||.|||||.||.||.||.|||
RBAM_000490__ 251 TCTCAAAACAATCAGTTTCTGTTTCTATCAACGGCAAGAAAAAGCAAATA 300
BSNT_00075___ 244 CGCACACATGCAAATACAGTCGGTGATCTTTTGG-AGACGCTT--GATAT 290
|||||.||||||||.||.||.||.||.|||.||| ||| || .||||
RBAM_000490__ 301 CGCACTCATGCAAAAACGGTTGGGGAACTTCTGGAAGA---TTTACATAT 347
BSNT_00075___ 291 AAAGACAAGAGACGAAGACAAGATCACACCTGCTAAACAGACAAAGATAA 340
|.||||.|||.|.||||||..|||.||.||..||||.||||| |.
RBAM_000490__ 348 AGAGACGAGAAATGAAGACCGGATTACCCCGTCTAAGCAGAC------AG 391
BSNT_00075___ 341 CA---GCAG---ACATGGACGTTGTGTATGAGGCTGCAAA----ACCTGT 380
|| |||| |||||.|.||.||||||||.|||||||| |.|.||
RBAM_000490__ 392 CATTGGCAGACAACATGAATGTCGTGTATGAAGCTGCAAAGCAGATCCGT 441
BSNT_00075___ 381 GAAGCTTACAATAAACGGGGAAGAAAAGACGTTATGGTCAACAGCAAAAA 430
| |.||||.|..|||.|||||||||||.|||||||||||.|||||||
RBAM_000490__ 442 G----TGACAAGAGGCGGAGAAGAAAAGACTTTATGGTCAACGGCAAAAA 487
BSNT_00075___ 431 CGGTCGGTGCATTACTGGACGAACAAGATGTTGA----TGTGAAAGAACA 476
|.|||||.|||||.|||.|||||||..|| | ||||||..|.||
RBAM_000490__ 488 CAGTCGGCGCATTTCTGAACGAACAGCAT----ACACCTGTGAATCAGCA 533
BSNT_00075___ 477 AGATCAAATTGATCCCGCAATAGATACGGATATTTCGAAAGACATGAAGA 526
.|||.||||.|||||.|||..|||||||.|..|..|.||.|.|||||| |
RBAM_000490__ 534 CGATAAAATAGATCCAGCAGCAGATACGAAAGTGACAAACGGCATGAA-A 582
BSNT_00075___ 527 TTAAC-ATAGAGCCCGCATTTCAGGTTACTGTGAATGATGCAGGGAAA-C 574
.|.|| .|.||.||.||.||||||||.|||||.|||||||| |||||| .
RBAM_000490__ 583 GTCACGGTCGACCCGGCTTTTCAGGTCACTGTAAATGATGC-GGGAAAGA 631
BSNT_00075___ 575 AAAAGAAGATCTGGACGACTTCGACTACGGTCGCTGACTTTTTAAAACAG 624
|||||||.||.||||||||||||||||||||||||||||||||||..|||
RBAM_000490__ 632 AAAAGAAAATATGGACGACTTCGACTACGGTCGCTGACTTTTTAACGCAG 681
BSNT_00075___ 625 CAAAAGATGAACATAAAAGACGAAGATAAAATCAAGCCTGCGTTAGATGC 674
||.||||||.||||.|||||||||||||||.|.||.||.||.|||.|.|.
RBAM_000490__ 682 CATAAGATGGACATGAAAGACGAAGATAAAGTAAAACCGGCATTACACGA 731
BSNT_00075___ 675 AAAGCTGACGAAAGGAA--AGGCTGATATTAC-AATTACTCGTATCGAAA 721
||||||.||.||| || ||||.|..| ||| |||.|||||||||||||
RBAM_000490__ 732 AAAGCTCACAAAA--AATCAGGCCGGCA-TACAAATCACTCGTATCGAAA 778
BSNT_00075___ 722 AGGTCACCGATGTAGTTGAAGAGAAGATTGCGT-TCGATGTGAAAAAGCA 770
|.|||||||||||||||||.||.||.||.|||| || |.||||||.|..|
RBAM_000490__ 779 AAGTCACCGATGTAGTTGAGGAAAAAATAGCGTATC-AAGTGAAAGAAAA 827
BSNT_00075___ 771 AGAAGACGCTTCTCTTGAAAAAGGGAAAGAAAAGGTCGTCCAAAAAGGAA 820
||||||.||.|||||.||.|..||||||||||||.||||.||||||||||
RBAM_000490__ 828 AGAAGATGCGTCTCTCGACAGCGGGAAAGAAAAGATCGTTCAAAAAGGAA 877
BSNT_00075___ 821 AAGAAGGCAAGCTAAAAAAACATTTCGAAGTCGTTAAAGAAAACGGTAAA 870
||||||||||.||.|||||.|||||..|.||.||.||||||||.||.|||
RBAM_000490__ 878 AAGAAGGCAAACTTAAAAAGCATTTTCATGTTGTCAAAGAAAATGGAAAA 927
BSNT_00075___ 871 GAAGTGTCCAGAGAGCTTGTAAAAGAAGAAACAGCTGAACAAAGCAAAGA 920
|||||.||.|||.|||||||.||||||||||||.|||||.||||||||||
RBAM_000490__ 928 GAAGTTTCAAGAAAGCTTGTTAAAGAAGAAACATCTGAAAAAAGCAAAGA 977
BSNT_00075___ 921 TAAAGTGATTGCTGTCGGCACAAAGCAAAGCAGTCCAAAATTTGAAACGG 970
|.|..|.|||||.|||||||||||||....||||||.||..||||...|.
RBAM_000490__ 978 TCAGATCATTGCGGTCGGCACAAAGCGGCACAGTCCCAAGATTGAGCAGC 1027
BSNT_00075___ 971 TCAGTG---------------CTTCAGGTGATTCAAAAACAGTTGTGTCC 1005
|||||| ||||.||.| ||||
RBAM_000490__ 1028 TCAGTGCACCTGTGAAGGCATCTTCGGGCG------AAAC---------- 1061
BSNT_00075___ 1006 CGCAGCAATGAATCAACAGGCAAAGTCATGACTGTATCATCTACGGCTTA 1055
.|.|||..|.||.|||||.||.||.||.||.||.||||||||
RBAM_000490__ 1062 --------CGGATCTTCCGGTAAAGTGATTACCGTGTCTTCCACGGCTTA 1103
BSNT_00075___ 1056 TACGGCAAGCTGCAGCGGTTGTTCAGGACATACAGCGACAGGCGTCAATT 1105
|||.||||||||||||||.|||||.||.|||||.||.||||||||.||..
RBAM_000490__ 1104 TACCGCAAGCTGCAGCGGCTGTTCCGGCCATACGGCTACAGGCGTTAACC 1153
BSNT_00075___ 1106 TAAAAAATAATCCGAATGCCAAAGTCATCGCTGTGGATCCAAATGTCATT 1155
|.|.||..|||||||||||.||||||||.||.||.||.||||..||||||
RBAM_000490__ 1154 TGACAAGCAATCCGAATGCTAAAGTCATTGCGGTAGACCCAAGCGTCATT 1203
BSNT_00075___ 1156 CCGCTAGGCTCCAAAGTCCACGTGGAAGGCTATGGATATGCCATTGCTGC 1205
|||||.|||.|.|.|||||||||.||.||.||.||..|||||.|.||.||
RBAM_000490__ 1204 CCGCTCGGCACAAGAGTCCACGTAGACGGATACGGGGATGCCGTGGCCGC 1253
BSNT_00075___ 1206 AGATACCGGTTCAGCGATTAAAGGGAACA-AGATAGACGTCTTTTTCCCA 1254
.|||||.||.|||||.|||||| ||||.| .|||.||.|||||||||||.
RBAM_000490__ 1254 TGATACAGGCTCAGCCATTAAA-GGAAGACGGATTGATGTCTTTTTCCCT 1302
BSNT_00075___ 1255 GAGAAATCATCGGCGTACCGATGGGGAAATAAAACA-GTCAAAATTAAAA 1303
||.|||||.|||||.|||||.|||||||| .||||| ||||||||.||||
RBAM_000490__ 1303 GAAAAATCTTCGGCTTACCGCTGGGGAAA-GAAACAGGTCAAAATAAAAA 1351
BSNT_00075___ 1304 TCTTAAATTAG 1314
||||||||||.
RBAM_000490__ 1352 TCTTAAATTAA 1362
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