Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00072 and RBAM_000470
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00072___metG.1.9828.seq
# -bsequence dna-align/RBAM_000470___metS.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00072___metG-RBAM_000470___metS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00072___metG-RBAM_000470___metS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00072___metG
# 2: RBAM_000470___metS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2000
# Identity: 1619/2000 (80.9%)
# Similarity: 1619/2000 (80.9%)
# Gaps: 13/2000 ( 0.6%)
# Score: 6502.5
#
#
#=======================================
BSNT_00072___ 1 ATGCCGCAAGAAAACAATACATTTTACATTACAACACCGATTTATTATCC 50
|||||||||||.||.|||||.|||||.||||||||.|||||.||||||||
RBAM_000470__ 1 ATGCCGCAAGACAATAATACTTTTTATATTACAACCCCGATATATTATCC 50
BSNT_00072___ 51 GAGCGGAAAATTACATATCGGCCATGCATATACGACAGTCGCGGGAGATG 100
|||||||||||||||||||||||||||.|||||.||.||.||.||.||||
RBAM_000470__ 51 GAGCGGAAAATTACATATCGGCCATGCTTATACTACCGTGGCCGGCGATG 100
BSNT_00072___ 101 CAATGGCACGTTACAAAAGACTAAAAGGGTTCGATGTTCGCTATTTAACG 150
|.|||||.||||||||||||.|||||||.||.||.||.|||||.|||||.
RBAM_000470__ 101 CGATGGCGCGTTACAAAAGATTAAAAGGATTTGACGTACGCTACTTAACC 150
BSNT_00072___ 151 GGAACGGACGAGCATGGACAAAAGATCCAGCAAAAAGCTGAACAGGAAAA 200
||||||||.|||||.|||||.||.||||||||.|||||.||..|.||.||
RBAM_000470__ 151 GGAACGGATGAGCACGGACAGAAAATCCAGCAGAAAGCGGAGGAAGAGAA 200
BSNT_00072___ 201 CATTACACCTCAGGAGTATGTGGATCGCGCAGCGGCAGATATTCAAAAAC 250
.||.||.|||||.|..|||||.|||||.||||..||.||.||.|||||||
RBAM_000470__ 201 TATCACGCCTCAAGCTTATGTAGATCGTGCAGTTGCTGAAATCCAAAAAC 250
BSNT_00072___ 251 TGTGGAAGCAGCTTGAAATCTCAAACGACGACTTTATCCGCACGACAGAA 300
|.|||||||||||.||.||.||..||||.||.||.|||||.|||||.|||
RBAM_000470__ 251 TATGGAAGCAGCTCGACATTTCTCACGATGATTTCATCCGGACGACGGAA 300
BSNT_00072___ 301 AAACGGCATAAAGTTGTCATTGAAAAAGTGTTTCAAAAGCTTCTTGATAA 350
|..|||||.||||...|.||.||.||||||||||||||.|||||||||||
RBAM_000470__ 301 AGCCGGCACAAAGAAATTATCGAGAAAGTGTTTCAAAAACTTCTTGATAA 350
BSNT_00072___ 351 CGGGGACATCTATCTTGATGAGTATGAAGGCTGGTACAGCATCCCTGATG 400
.||.|||||.||.||.|||||||||||.||||||||||||||||||||||
RBAM_000470__ 351 TGGTGACATTTACCTGGATGAGTATGAGGGCTGGTACAGCATCCCTGATG 400
BSNT_00072___ 401 AAACGTTCTACACGGAAACTCAGCTCGTTGATATTGAGCGGAATGAAAAG 450
||||.|||||.||||||||.|||||.||.|||.|.||..|.|||||.|||
RBAM_000470__ 401 AAACATTCTATACGGAAACACAGCTGGTGGATGTGGAAAGAAATGAGAAG 450
BSNT_00072___ 451 GGAGAGGTCATCGGCGGAAAAAGCCCTGACAGCGGTCACCCAGTTGAATT 500
||.|||||..||||||||||||||||.||||||||.||.||.||.|||||
RBAM_000470__ 451 GGTGAGGTTGTCGGCGGAAAAAGCCCGGACAGCGGCCATCCGGTCGAATT 500
BSNT_00072___ 501 GATCAAAGAGGAATCTTATTTCTTCCGCATGGGGAAATACGCGGATCGTC 550
.|||||||||||.||.||.||||||||||||.|.||||||||.||.||.|
RBAM_000470__ 501 AATCAAAGAGGAGTCATACTTCTTCCGCATGAGCAAATACGCAGACCGCC 550
BSNT_00072___ 551 TTCTGAAATACTATGAAGAAAACCCGACATTCATTCAGCCAGAATCACGC 600
|.|||||.|..|||||.|||||.||..|.|||||.|||||.|||||||||
RBAM_000470__ 551 TGCTGAAGTTTTATGAGGAAAATCCTTCTTTCATCCAGCCTGAATCACGC 600
BSNT_00072___ 601 AAAAACGAAATGATTAATAACTTTATCAAACCTGGACTTGAGGATTTGGC 650
|||||.|||||||||||.|||||.||.|||||.||.|||||.||||||||
RBAM_000470__ 601 AAAAATGAAATGATTAACAACTTCATTAAACCGGGGCTTGAAGATTTGGC 650
BSNT_00072___ 651 AGTATCACGTACCACTTTTGATTGGGGCGTGAAGGTGCCGGAAAATCCAA 700
.||.||..|.||.||.||.||.||||||||.||.|||||||.||||||.|
RBAM_000470__ 651 CGTTTCCAGAACGACGTTCGACTGGGGCGTAAAAGTGCCGGGAAATCCGA 700
BSNT_00072___ 701 AGCATGTTGTATATGTTTGGATTGACGCACTATTTAACTATTTAACGGCA 750
|||||||.||.|||||.||||||||||||||.||.||||||.||||.||.
RBAM_000470__ 701 AGCATGTCGTGTATGTATGGATTGACGCACTGTTCAACTATATAACAGCG 750
BSNT_00072___ 751 CTCGGTTATGATACAGAAAATGATGAGCTTTATCAAAAA-TATTGGCCTG 799
||||||||.|||||.||||||||||||||||| |||||| ||.|||||.|
RBAM_000470__ 751 CTCGGTTACGATACGGAAAATGATGAGCTTTA-CAAAAAGTACTGGCCGG 799
BSNT_00072___ 800 CCGATGTTCATTTAGTCGGTAAGGAGATTGTACGATTCCATACTATTTAC 849
|.||.||.|||.|.||||||||.||.|||||.||.||.|||||.||||||
RBAM_000470__ 800 CTGACGTCCATCTTGTCGGTAAAGAAATTGTCCGTTTTCATACCATTTAC 849
BSNT_00072___ 850 TGGCCAATTATGCTGATGGCGCTGGATCTTCCGCTGCCAAAGCAAGTATT 899
|||||.|||||||||||||||||.|||||.||||||||.||||||||.||
RBAM_000470__ 850 TGGCCGATTATGCTGATGGCGCTTGATCTCCCGCTGCCTAAGCAAGTCTT 899
BSNT_00072___ 900 CGCGCATGGCTGGCTTTTGATGAAAGACGGAAAAATGTCGAAATCAAAAG 949
|||||||||||||.|.||||||||||||||||||||||||||||||||||
RBAM_000470__ 900 CGCGCATGGCTGGTTATTGATGAAAGACGGAAAAATGTCGAAATCAAAAG 949
BSNT_00072___ 950 GAAACGTTGTAGATCCGGTTACATTAATTGAGCGCTATGGTTTAGACGAG 999
||||.|||||.||||||||.||.||||||||.|||||.||.||.||.||.
RBAM_000470__ 950 GAAATGTTGTTGATCCGGTAACGTTAATTGAACGCTACGGCTTGGATGAA 999
BSNT_00072___ 1000 CTTCGCTATTACCTGCTTCGCGAAGTGCCGTTCGGATCTGACGGTGTTTT 1049
||||||||||||||||||||||||||.||||||||.||.||||||||.||
RBAM_000470__ 1000 CTTCGCTATTACCTGCTTCGCGAAGTACCGTTCGGTTCAGACGGTGTCTT 1049
BSNT_00072___ 1050 CACGCCGGAAGGATTTGTTGAGCGAATCAACTATGATTTAGCGAATGATT 1099
.|||||||||||.||.||.||.||.||.||.|||||.||.|||||.||.|
RBAM_000470__ 1050 TACGCCGGAAGGTTTCGTAGAACGGATTAATTATGACTTGGCGAACGACT 1099
BSNT_00072___ 1100 TAGGAAATCTATTGAATCGTACTGTTGCGATGATCAATAAGTATTTTGAC 1149
|||||||.||..||||||||||.||.||.||||||.|.||.|||||||||
RBAM_000470__ 1100 TAGGAAACCTTCTGAATCGTACAGTCGCAATGATCCAAAAATATTTTGAC 1149
BSNT_00072___ 1150 GGACAAATTGGTTCTTACAAAGGTGCTGTTACGGAATTTGA-CCAAACGC 1198
||..|.||||||||.||..||||...|||.||.||.||||| .||.| ||
RBAM_000470__ 1150 GGCGAGATTGGTTCATATGAAGGAAATGTGACCGATTTTGATTCAGA-GC 1198
BSNT_00072___ 1199 TCACTTCTGTTGCTGAAGAAACAGTGAAAGCTTATGAGAAAGCAATGGAA 1248
|..|||||||.||.|..|||||.||.|||||||||||.||.|||||||||
RBAM_000470__ 1199 TTTCTTCTGTAGCCGGTGAAACGGTTAAAGCTTATGAAAAGGCAATGGAA 1248
BSNT_00072___ 1249 AATATGGAGTTCTCGGTAGCACTTTCGACTTTATGGCAGCTCATCAGCCG 1298
||.||||||||.||.||.||..|.||.||..|||||||..|.||||||||
RBAM_000470__ 1249 AACATGGAGTTTTCAGTCGCTTTATCAACGCTATGGCAATTAATCAGCCG 1298
BSNT_00072___ 1299 CACAAACAAATACATTGATGAGACAGCTCCATGGGTGCTTGCGAAAGATC 1348
.||.|||||.||.||||||||.||.|||||.|||||||||||.|||||||
RBAM_000470__ 1299 TACGAACAAGTATATTGATGAAACTGCTCCGTGGGTGCTTGCTAAAGATC 1348
BSNT_00072___ 1349 CGGCAAAAGAAGAAGAATTGCGATCAGTTATGTATCATCTCGCTGAATCA 1398
.||.|||||||.|||||||.||.||.||.|||||||||.|.||||||||.
RBAM_000470__ 1349 AGGAAAAAGAAAAAGAATTACGTTCTGTCATGTATCATTTAGCTGAATCT 1398
BSNT_00072___ 1399 TTGCGTATTTCAGCGGTACTGCTTCAGCCATTCTTAACAAAAACACCTGA 1448
||.|||||.|||||.|||.||||.|||||.|||||.|||.||||.|||||
RBAM_000470__ 1399 TTACGTATCTCAGCCGTATTGCTCCAGCCTTTCTTGACACAAACGCCTGA 1448
BSNT_00072___ 1449 AAAAATGTTCGAGCAGCTAGGCATTACTGATGACTCTCTAAAAGCTTGGG 1498
|||||||||.|..|||||.||..||...|||.|.|||||.|||||.||||
RBAM_000470__ 1449 AAAAATGTTTGCCCAGCTCGGAGTTGAGGATCAGTCTCTTAAAGCATGGG 1498
BSNT_00072___ 1499 ACAGCATTACAG-CTTTCGGCCAGCTGAAAGATACAAAAGTACAAAAAGG 1547
|||||||| ||| |.||||||||..||||..|..|.|||||..|||||||
RBAM_000470__ 1499 ACAGCATT-CAGACATTCGGCCAATTGAAGAACGCGAAAGTGAAAAAAGG 1547
BSNT_00072___ 1548 CGAGCCGTTGTTCCCTCGTTTAGAGGCAGAAGAAGAAATTGCTTACATCA 1597
.||.|||.|.|||||||||.|.||.||.|||||.|||.|.||||||||||
RBAM_000470__ 1548 GGAACCGCTTTTCCCTCGTCTTGAAGCTGAAGAGGAAGTAGCTTACATCA 1597
BSNT_00072___ 1598 AAGGGAAAATGCAAGGTTCGGCACCAGCGAAAGAAGAAACAAGAGAAGAA 1647
|....|||||||||||..|.||.||.||.||||||||| ||| |..|||
RBAM_000470__ 1598 AGCAAAAAATGCAAGGAACTGCTCCTGCTAAAGAAGAA--AAG-GCGGAA 1644
BSNT_00072___ 1648 GAGCCGCAAGAGGTCGATCGTTTACCTGAAATTACGATTGATCAATTCAT 1697
|||||||||||.|..||.|||.|.||||||||||||.||||||||||.||
RBAM_000470__ 1645 GAGCCGCAAGAAGCAGAGCGTCTTCCTGAAATTACGTTTGATCAATTTAT 1694
BSNT_00072___ 1698 GGATGTAGAGCTTCGCGTAGCTGAGGTCATTG-AGGCAGAGCCAGTGAAA 1746
||||..|||.||||||||.||.||.||| ||| ..||||||||.||||||
RBAM_000470__ 1695 GGATACAGAACTTCGCGTCGCAGAAGTC-TTGTCCGCAGAGCCGGTGAAA 1743
BSNT_00072___ 1747 AAAGCAGACCGTTTATTGAAGCTGCAGCTTGATCTTGGTTTTGAAAAGCG 1796
||||||||.||..|..||||..||||..|||||||.||.||||||.||||
RBAM_000470__ 1744 AAAGCAGATCGGCTGCTGAAATTGCAAATTGATCTGGGCTTTGAACAGCG 1793
BSNT_00072___ 1797 CCAAGTGGTATCCGGCATTGCGAAGCATTATACGCCTGAAGAGCTTGTTG 1846
||||||.|||||.||.||.|||||||||||.||.||.||..|||||||.|
RBAM_000470__ 1794 CCAAGTTGTATCAGGTATCGCGAAGCATTACACACCGGATCAGCTTGTGG 1843
BSNT_00072___ 1847 GAAAAAAACTCGTTTGTGTAACAAATCTAAAACCGGTTAAACTCAGAGGA 1896
|||..||..||.||||||||||.||||||||||||||.|||||.|||||.
RBAM_000470__ 1844 GAATGAAGATCATTTGTGTAACGAATCTAAAACCGGTAAAACTGAGAGGC 1893
BSNT_00072___ 1897 GAGCTTTCTCAAGGTATGATCCTTGCAGGAGAAGCAGACGGCGT-TTTAA 1945
||||||||||||||.|||||.||.|||||||||.|.|||||||| .||||
RBAM_000470__ 1894 GAGCTTTCTCAAGGAATGATACTGGCAGGAGAATCGGACGGCGTACTTAA 1943
BSNT_00072___ 1946 AGGTCGTGTCTATCGATCAGTCGTTACCAAAAGGCACAAGAATTAAATAA 1995
| ||.||..||.||||.|||||.|||||.||||||||..|||||||||||
RBAM_000470__ 1944 A-GTTGTAGCTGTCGACCAGTCATTACCGAAAGGCACTCGAATTAAATAA 1992
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