Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00070 and RBAM_000450
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00070___yabC.1.9828.seq
# -bsequence dna-align/RBAM_000450___yabC.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00070___yabC-RBAM_000450___yabC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00070___yabC-RBAM_000450___yabC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00070___yabC
# 2: RBAM_000450___yabC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 899
# Identity: 678/899 (75.4%)
# Similarity: 678/899 (75.4%)
# Gaps: 37/899 ( 4.1%)
# Score: 2502.5
#
#
#=======================================
BSNT_00070___ 1 ATGTTAAGGCGCCAAATGAGCTTTAATGGAAAGTCGGACATGGGAATTCT 50
||||||||.|||||.|||||.|||||.|||||.||.||.|||||||.|||
RBAM_000450__ 1 ATGTTAAGACGCCAGATGAGTTTTAACGGAAAATCTGAAATGGGAACTCT 50
BSNT_00070___ 51 TTACTTGGTCCCAACCCCAATCGGAAATCTAGAGGACATGACATTCCGGG 100
.|||.|.||.||.||.||.|||||.|||.|.|||||||||||.||.||.|
RBAM_000450__ 51 GTACCTTGTTCCTACACCGATCGGCAATTTGGAGGACATGACCTTTCGTG 100
BSNT_00070___ 101 CGATCGACACGCTGAAATCAGTAGATGCGATTGCTGCGGAAGATACGAGG 150
|..|.||.|||||||||||.|..||||..||.|||||.|||||||||||.
RBAM_000450__ 101 CAGTAGAGACGCTGAAATCGGCCGATGTCATAGCTGCAGAAGATACGAGA 150
BSNT_00070___ 151 CAAACGAAAAAGCTTTGTCATGTATATGAAATTGAAACACCGCTCGTCAG 200
||.|||||||||||.||.|||||.|||||.||.||||||.|.|||.||||
RBAM_000450__ 151 CAGACGAAAAAGCTGTGCCATGTTTATGACATAGAAACATCTCTCATCAG 200
BSNT_00070___ 201 CTATCACGAACACAATAAAGAAAGCAGTGGGCACAAAATTATTGAATGGC 250
||||||.|||||.||||||||||||||.||.||.|||||.||||||||||
RBAM_000450__ 201 CTATCATGAACATAATAAAGAAAGCAGCGGCCATAAAATCATTGAATGGC 250
BSNT_00070___ 251 TGAAATCGGGAAAAAA-----CATTGCTCTTGTCAGTGATGCCGGTCTGC 295
|||||...|||||.|| ||||| ||||||||||||||..|||
RBAM_000450__ 251 TGAAAAGCGGAAAGAATGTGGCATTG-----GTCAGTGATGCCGGCATGC 295
BSNT_00070___ 296 CGACGATTTCTGATCCCGGAGCCGAAATTGTAAAAGATTTTACGGATATA 345
||||.|||||.||.||.||.||.||.|||||.|.||||||.||..|.||.
RBAM_000450__ 296 CGACAATTTCCGACCCGGGGGCTGAGATTGTGAGAGATTTCACCCAAATC 345
BSNT_00070___ 346 GGCGGTTATGTTGTTCCGTTGCCGGGAGCAAATGCTGCATTAACAGCTCT 395
|||||.|||||.||||||.|.|||||.||.|||||.||||||||.||.||
RBAM_000450__ 346 GGCGGATATGTCGTTCCGCTCCCGGGTGCTAATGCGGCATTAACCGCGCT 395
BSNT_00070___ 396 TATTGCTTCAGGTATTGTACCGCAGCCTTTTTTCTTTTACGGTTTTCTCA 445
.|..||.|||||.||....||||||||.||||||||.|||||.|||.|.|
RBAM_000450__ 396 GACCGCATCAGGCATCACCCCGCAGCCGTTTTTCTTCTACGGATTTTTAA 445
BSNT_00070___ 446 ACAGACAGAAAAAAGAAAAGAAGAAGGAGCTTGAAGCCCTTAAAAAACGG 495
|||||||||||||||||||||||||.||.||||||..|||.|||||||||
RBAM_000450__ 446 ACAGACAGAAAAAAGAAAAGAAGAAAGAACTTGAAATCCTGAAAAAACGG 495
BSNT_00070___ 496 CAGGAAACGATCATTTTTTATGAAGCGCCTCACAGATTGAAGGAAACCTT 545
|||||||||||.||.|||||.||||||||.||||||||.||.|||||.||
RBAM_000450__ 496 CAGGAAACGATGATATTTTACGAAGCGCCGCACAGATTAAAAGAAACATT 545
BSNT_00070___ 546 GTCAGCGATGGCA-GAGATATTAGGAGATCGGGAA--ATCGCTGTAACGC 592
..||||.|| ||| ||..|.||.||..||| ||| |||||.||.|||.
RBAM_000450__ 546 AACAGCAAT-GCATGACGTTTTGGGTAATC--GAACCATCGCCGTCACGA 592
BSNT_00070___ 593 GTGAACTCACTAAGAAATATGAAGAGTTTATCCGAGGAACGATATCCGAG 642
|.|||.|.||.||.||.||.||.||.||.|||.|||||||.||..|||||
RBAM_000450__ 593 GAGAATTAACGAAAAAGTACGAGGAATTCATCAGAGGAACCATCGCCGAG 642
BSNT_00070___ 643 GTCATTGGATGGGCAAACGAGGATCAGATACGCGGCGAGTTTTGTCTTGT 692
||.||.|.|||||||||.||.|||||.||.|||||.|||||.|||||.||
RBAM_000450__ 643 GTGATGGAATGGGCAAATGAAGATCAAATCCGCGGTGAGTTCTGTCTCGT 692
BSNT_00070___ 693 TGTAGAAGGAAGTAATAA----TGAAGAGGTAGATGAGGAAGAACAATGG 738
.||.|||||||.|.| || ||||..||..||.||||||.|.|..|||
RBAM_000450__ 693 CGTCGAAGGAAATCA-AACCGCTGAACCGGATGAAGAGGAAAAGCCTTGG 741
BSNT_00070___ 739 TGGGAAAC---CCTCACTGCGAAAGAACATGTCGAGCATTACATCTCGA- 784
||| || .||..|||.||||||.|||||.||||||||||| |
RBAM_000450__ 742 TGG---ACGGAGCTTTCTGAGAAAGAGCATGTGGAGCATTACAT----AA 784
BSNT_00070___ 785 ---AAGGCGCTACTTCTAAAGAAGCCATTAAAAAAGCAGCAGTCGATCGC 831
||||.||..||||.|||.|.|||||.|||.||.||||.||.|||||.
RBAM_000450__ 785 ACGAAGGAGCATCTTCCAAACAGGCCATAAAACAAACAGCGGTAGATCGG 834
BSNT_00070___ 832 AATGTACCAAAGCGTGAAGTGTACGATGCTTACCATATT-AAGCAATAA 879
...||.||.||.||.||..|.||.||||||||.||.||| ||.| ||||
RBAM_000450__ 835 GGCGTTCCGAAACGCGAGATTTATGATGCTTATCACATTCAATC-ATAA 882
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