Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00066 and RBAM_000420
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00066___yabA.1.9828.seq
# -bsequence dna-align/RBAM_000420___yabA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00066___yabA-RBAM_000420___yabA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00066___yabA-RBAM_000420___yabA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00066___yabA
# 2: RBAM_000420___yabA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 360
# Identity: 302/360 (83.9%)
# Similarity: 302/360 (83.9%)
# Gaps: 0/360 ( 0.0%)
# Score: 1278.0
#
#
#=======================================
BSNT_00066___ 1 TTGGATAAAAAAGAGTTATTTGATACAGTCATTAACTTAGAAGAACAAAT 50
||||||||||||||||||||||||||.|||||.|||.|.||.||||||||
RBAM_000420__ 1 TTGGATAAAAAAGAGTTATTTGATACTGTCATAAACCTGGAGGAACAAAT 50
BSNT_00066___ 51 TGGCTCACTGTACCGGCAGCTGGGGGATTTGAAGCAGCATATCGGTGAGA 100
.||.||.||||||||.||||||||.||.||.||||||||||||||.||.|
RBAM_000420__ 51 CGGTTCGCTGTACCGTCAGCTGGGTGACTTAAAGCAGCATATCGGCGAAA 100
BSNT_00066___ 101 TGATTGAGGAAAATCATCATTTACAGCTTGAAAACAAGCATTTGCGCAAA 150
|||||||.||.|||||.|||.|.|||||||||||.|||||||||||.||.
RBAM_000420__ 101 TGATTGAAGAGAATCACCATCTTCAGCTTGAAAATAAGCATTTGCGTAAG 150
BSNT_00066___ 151 CGGCTGGACGATACGACGCAGCAGATTGAAAAGTTCAAAGCTGATAAAAA 200
|||||.||.||||||||..||||.|||||.||.||||||||.|||.|.||
RBAM_000420__ 151 CGGCTTGATGATACGACAGAGCAAATTGAGAAATTCAAAGCCGATCAGAA 200
BSNT_00066___ 201 AGAATCAAAAACACAGAAGACGGAGCAAACTGATATAGGGGAAGGATATG 250
||||.||||||||||||||.|.|||||.|.|||||||||.|||||.||.|
RBAM_000420__ 201 AGAAACAAAAACACAGAAGGCAGAGCAGAGTGATATAGGAGAAGGGTACG 250
BSNT_00066___ 251 ATAATCTGGCACGTCTGTATCAAGAAGGATTTCATATCTGCAATGTCCAC 300
|.||||||||.||.||||||||||||||.||||||||.|||||.|||||.
RBAM_000420__ 251 ACAATCTGGCCCGGCTGTATCAAGAAGGCTTTCATATTTGCAACGTCCAT 300
BSNT_00066___ 301 TATGGAAGTGTTCGAAAAGAGGATTGTCTTTTCTGTCTGTCATTCTTAAA 350
|||||.||.||.||.||.|..|||||.|||||.||||||||.||||||||
RBAM_000420__ 301 TATGGGAGCGTCCGCAAGGGAGATTGCCTTTTTTGTCTGTCCTTCTTAAA 350
BSNT_00066___ 351 TAAAAAATAG 360
|||||||||.
RBAM_000420__ 351 TAAAAAATAA 360
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