Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00065 and RBAM_000410
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00065___yaaT.1.9828.seq
# -bsequence dna-align/RBAM_000410___yaaT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00065___yaaT-RBAM_000410___yaaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00065___yaaT-RBAM_000410___yaaT.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00065___yaaT
# 2: RBAM_000410___yaaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity: 711/828 (85.9%)
# Similarity: 711/828 (85.9%)
# Gaps: 0/828 ( 0.0%)
# Score: 3087.0
#
#
#=======================================
BSNT_00065___ 1 TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTA 50
||||||||.|||||.||.|||||||||||.||||||||.|||||.|||||
RBAM_000410__ 1 TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTA 50
BSNT_00065___ 51 TTTTGATCCGAATGGATTTCATATAGAACATGACAGCTGCGTAATTGTAG 100
||||||||||||.||||||.||||||||||.|||||||||||.|||||.|
RBAM_000410__ 51 TTTTGATCCGAACGGATTTGATATAGAACAAGACAGCTGCGTCATTGTTG 100
BSNT_00065___ 101 AAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAG 150
||||.||.|||||.||.||.|||||.|||||.||.||.|||||||||||.
RBAM_000410__ 101 AAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAA 150
BSNT_00065___ 151 GTGGATGAGCATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGC 200
|||||.|||||||||||.||||||||.||||||||.||.|||||.||.||
RBAM_000410__ 151 GTGGACGAGCATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGC 200
BSNT_00065___ 201 TGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAGGAAGCACTAT 250
|||.||.||||||||||||||||||||||||||.||||||||.||.||.|
RBAM_000410__ 201 TGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAGGAGGCCCTGT 250
BSNT_00065___ 251 CAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATG 300
|.||.|||||..||||.||.||.||||||..|||.||.|||||.||||||
RBAM_000410__ 251 CCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATG 300
BSNT_00065___ 301 AAGCTGGTCGATGTTGAATTCACGTTTGATCGCAATAAAGTCATTTTTTA 350
||||||||.||||||||.||.||.|||||.||||||||||||||||||||
RBAM_000410__ 301 AAGCTGGTTGATGTTGAGTTTACATTTGACCGCAATAAAGTCATTTTTTA 350
BSNT_00065___ 351 CTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG 400
|||.||.||.|||||.||.||.||.||.||.||..|.||.||.||.||||
RBAM_000410__ 351 CTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG 400
BSNT_00065___ 401 CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGAT 450
|||||||||||||.||.|||||.||..|||||||||||||.||||||||.
RBAM_000410__ 401 CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGAC 450
BSNT_00065___ 451 GAGGCAAAAATGCTCGGAGGAATCGGTCCTTGCGGAAGAATGCTTTGCTG 500
|||||.|||||||||||.||.|||||.||.|||||.||||||||||||||
RBAM_000410__ 451 GAGGCGAAAATGCTCGGCGGTATCGGACCATGCGGGAGAATGCTTTGCTG 500
BSNT_00065___ 501 TTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGG 550
.||.|||||.||.||.|||||||||||.||.|||||.||||||||.||||
RBAM_000410__ 501 CTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGG 550
BSNT_00065___ 551 ATCAGAACTTGTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGA 600
||||.||.||.||.||.||.||.|||||||||||.|||||.|||||.||.
RBAM_000410__ 551 ATCAAAATTTATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGT 600
BSNT_00065___ 601 TTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGACGGCAAAAGA 650
||||||||||||.|.||.||.||.||.|||||||||||||||||||||||
RBAM_000410__ 601 TTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGACGGCAAAAGA 650
BSNT_00065___ 651 ACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGA 700
||||||.||||||.||||.||||||||||||||.||||||||.|||||.|
RBAM_000410__ 651 ACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAA 700
BSNT_00065___ 701 AGGTCGTCGGACTAAATATTCTGGAACGGGTGCTTCAGGTGGAACTGATA 750
||||.|||||.||.||||||||||||||||||||||||||||||||||..
RBAM_000410__ 701 AGGTTGTCGGTCTTAATATTCTGGAACGGGTGCTTCAGGTGGAACTGAAG 750
BSNT_00065___ 751 AACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG 800
||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000410__ 751 AATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG 800
BSNT_00065___ 801 CGTCGTATCCGCACAAACCACAGATTAA 828
||||||||||||||||||||||||||||
RBAM_000410__ 801 CGTCGTATCCGCACAAACCACAGATTAA 828
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