Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00036 and RBAM_000230
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_00036___yaaJ.1.9828.seq
# -bsequence dna-align/RBAM_000230___yaaJ.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00036___yaaJ-RBAM_000230___yaaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00036___yaaJ-RBAM_000230___yaaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00036___yaaJ
# 2: RBAM_000230___yaaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 495
# Identity: 368/495 (74.3%)
# Similarity: 368/495 (74.3%)
# Gaps: 21/495 ( 4.2%)
# Score: 1339.0
#
#
#=======================================
BSNT_00036___ 1 ATGACACAAGATGAACTTTATATGAAAGAAGCAATTAAAGAAGCGAAAAA 50
|||| |.||||||..||||||||.||||||.||.|||||||||||.||
RBAM_000230__ 1 ATGA---ATGATGAATATTATATGAGAGAAGCCATAAAAGAAGCGAAGAA 47
BSNT_00036___ 51 GGCTGAAGAGAAAGGTGAAGTGCCAATAGGTGCGGTGCTTGTCGTTAATG 100
.||.||||.|||||||||||||||.||.||.||.||.|||||..|..|.|
RBAM_000230__ 48 AGCCGAAGCGAAAGGTGAAGTGCCGATCGGAGCAGTTCTTGTTTTGCACG 97
BSNT_00036___ 101 ATGAAATTATAGCGCGTGCACATAATTTAAGAGAGACTGAGCAACGATCT 150
||||.||..|.|||||.||.||||||.|..|.||||||||.||..|.||.
RBAM_000230__ 98 ATGAGATCGTGGCGCGGGCGCATAATCTGCGGGAGACTGAACAGAGGTCG 147
BSNT_00036___ 151 ATTGCCCATGCAGAAATGCTTGTAATTGATGAAGCAT---GTAAGGCACT 197
.|||||||.||.||||||||.|..||.||.|||||.| ||||| ||
RBAM_000230__ 148 CTTGCCCACGCCGAAATGCTGGCGATAGACGAAGCGTGCCGTAAG---CT 194
BSNT_00036___ 198 CGGAACATGGCGGCTGGAAGGTGCGACTCTTTATGTGACGCTTGAGCCAT 247
.||.||||||.|.||.||.|.|||...|||||||||.||..|.|||||.|
RBAM_000230__ 195 GGGGACATGGAGACTTGAGGATGCCGTTCTTTATGTCACTTTGGAGCCGT 244
BSNT_00036___ 248 GTCCAATGTGTGCTGGTGCCGTCGTACTTTCTCGAGTGGAAAAAGTGGTT 297
||||.||||||||.||.||||||||.|||||..||||.||.||.||.||.
RBAM_000230__ 245 GTCCGATGTGTGCGGGAGCCGTCGTGCTTTCGAGAGTCGATAAGGTCGTA 294
BSNT_00036___ 298 TTTGGCGCATTTGATCCGAAAGGCGGCTGTTCAGGCACACTAATGAACCT 347
||.||||||||||||||.||.||.||||||.||||.||.||.|||||||
RBAM_000230__ 295 TTCGGCGCATTTGATCCCAAGGGGGGCTGTACAGGAACGCTGATGAACC- 343
BSNT_00036___ 348 TCTT-CAGGAGGAACGCTTTAATCATCAGGCTGAAGTGGTGAGCGGTGTA 396
|||| |||||.||.||.||.||.||.||.||.||||||||||||||.||.
RBAM_000230__ 344 TCTTGCAGGAAGAGCGGTTCAACCACCAAGCGGAAGTGGTGAGCGGCGTG 393
BSNT_00036___ 397 CTTGAGGAAGAATGCGGCGGAATGCTCAGTGCGTTTTTCAGAGAACTAAG 446
||.|..|||||.|||||.|.|||||||||.||.|||||||||.|.||..|
RBAM_000230__ 394 CTCGGAGAAGAGTGCGGAGAAATGCTCAGCGCTTTTTTCAGAAAGCTGCG 443
BSNT_00036___ 447 -----AAAAAAGAAGAAAGCCGCCAGGAAAAACTTGTCTGAATAG 486
|| |||||||.|...||||||||.||||||||.|||
RBAM_000230__ 444 CCGGCAA-----AAGAAAGACATGAGGAAAAAGTTGTCTGAGTAG 483
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