Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00032 and RBAM_000200
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_00032___dgk.1.9828.seq
# -bsequence dna-align/RBAM_000200___dgk.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00032___dgk-RBAM_000200___dgk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00032___dgk-RBAM_000200___dgk.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00032___dgk
# 2: RBAM_000200___dgk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 636
# Identity: 493/636 (77.5%)
# Similarity: 493/636 (77.5%)
# Gaps: 24/636 ( 3.8%)
# Score: 1920.0
#
#
#=======================================
BSNT_00032___ 1 ATGAATACAGCCCCTTTTATTGCAATAGAAGGTCCTATCGGGGCAGGAAA 50
|||||.|.||||||||||||.||..|||||||||||||||||||||||||
RBAM_000200__ 1 ATGAACAGAGCCCCTTTTATCGCGGTAGAAGGTCCTATCGGGGCAGGAAA 50
BSNT_00032___ 51 AACAACTCTCGCAACGATGCTCTCACAAGAATTCGGATTCCCTATGATCA 100
|||.||.|||||.||||||||.||..||||..||||.||.||||||||.|
RBAM_000200__ 51 AACGACACTCGCTACGATGCTTTCTGAAGAGCTCGGTTTTCCTATGATTA 100
BSNT_00032___ 101 ATGAGATTGTAGAGGATAACCCGTACCTTGATAAGTTTTATGACAATATA 150
||||||||||.||.||.|||||.||.||.||||||||||||||||||||.
RBAM_000200__ 101 ATGAGATTGTGGAAGACAACCCTTATCTCGATAAGTTTTATGACAATATC 150
BSNT_00032___ 151 GAGGAATGGAGCTTCCAGCTCGAGATGTTTTTTCTTTGTCACAGATACAA 200
|||||.|||||.||||||||.||.|||||||||||.||||||||.||.||
RBAM_000200__ 151 GAGGAGTGGAGTTTCCAGCTTGAAATGTTTTTTCTATGTCACAGGTATAA 200
BSNT_00032___ 201 ACAGCTTGAAGACACCAGTGATC---ACTTTTTAAAAAAGGGACAGCCTG 247
|||||||||||||||| |||| |.|.|||||||.|.||||||||.|
RBAM_000200__ 201 ACAGCTTGAAGACACC---GATCGAGATTATTTAAAACAAGGACAGCCCG 247
BSNT_00032___ 248 TAATAGCTGATTATCATATTTATAAAAATGTGATTTTTGCGGAACGCACC 297
|..|..|.|||||||||||||||||||||||.|||||.||.||.||.||.
RBAM_000200__ 248 TTTTGTCCGATTATCATATTTATAAAAATGTTATTTTCGCAGAGCGTACA 297
BSNT_00032___ 298 TTGTCTCCA----CATCAGCTGGAAAAATACAAAAAGATATATCACCTGC 343
||| || ||..||||.||.||.||.||..||||.||||||||||
RBAM_000200__ 298 TTG----CACGGCCAAAAGCTTGAGAAGTATAAGCAGATCTATCACCTGC 343
BSNT_00032___ 344 TAACGGATGATCTGCCAAAGCCGAATTTCATCATTTACATAAAGGCCAGT 393
|.||..|.||.|||||.|||||||||.||||..|.|||||||||||.||.
RBAM_000200__ 344 TCACTCACGACCTGCCGAAGCCGAATATCATTGTATACATAAAGGCAAGC 393
BSNT_00032___ 394 CTGCCTACATTGCTACACCGCATTGAAAAACGCGGGCGCCCCTTTGAGAA 443
|||||.||||||||.||.|||||.|||||||||||||||||.||||||||
RBAM_000200__ 394 CTGCCGACATTGCTTCAACGCATCGAAAAACGCGGGCGCCCGTTTGAGAA 443
BSNT_00032___ 444 AAAAATTGAAACTAGC-----TATTTGGAGCAGCTGATTTCAGATTATGA 488
|||.|| |.||| |||.||||.|..||.|||.|||||||.||
RBAM_000200__ 444 AAATAT-----CGAGCATCAATATCTGGAACGTCTCATTACAGATTACGA 488
BSNT_00032___ 489 AGTCGCCATCAAGCAGCTGCAGGAAGCAGACCCTGAACTTACAGTGTTAA 538
....|||||||..|||||.|||||||.||||||.||..|..|.||..|.|
RBAM_000200__ 489 CACAGCCATCAGACAGCTTCAGGAAGAAGACCCGGATATATCTGTACTGA 538
BSNT_00032___ 539 CCGTAGATGGTGATTCAAAGGATTTCGTTTTGAATAAGAGCGACTTTGAA 588
||.|.||.||||||.|..|.||.||.|||||||||||||..||||.||||
RBAM_000200__ 539 CCATTGACGGTGATACTGAAGACTTTGTTTTGAATAAGACAGACTATGAA 588
BSNT_00032___ 589 CGCATTGCCGCCCATGTAAAGGAGCTTATCGTATGA 624
.|.||||||...||.||||||||||||||...||||
RBAM_000200__ 589 AGAATTGCCCGTCAGGTAAAGGAGCTTATTAAATGA 624
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