Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00031 and RBAM_000190
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_00031___dck.1.9828.seq
# -bsequence dna-align/RBAM_000190___dcK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00031___dck-RBAM_000190___dcK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00031___dck-RBAM_000190___dcK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00031___dck
# 2: RBAM_000190___dcK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 669
# Identity: 519/669 (77.6%)
# Similarity: 519/669 (77.6%)
# Gaps: 30/669 ( 4.5%)
# Score: 2008.5
#
#
#=======================================
BSNT_00031___ 1 ATGAAGGAACA-TCATATCCCTAACAATTCAATTATTACAGTAGCAGGAA 49
|||||.| ||| ||||||.||.|||||..|.|||||.||||||||.||||
RBAM_000190__ 1 ATGAAAG-ACATTCATATTCCAAACAACGCCATTATAACAGTAGCGGGAA 49
BSNT_00031___ 50 CAGTAGGTGTCGGAAAATCGACTTTAACAAAAACTTTAGCTAAACGGCTT 99
|.|||||.|||||||||||||||||.||.|||.|||||||.||||||||.
RBAM_000190__ 50 CGGTAGGAGTCGGAAAATCGACTTTGACCAAAGCTTTAGCAAAACGGCTC 99
BSNT_00031___ 100 GGATTTAAAACATCGTTGGAGGAAGTCGATCATAATCCATACTTGGAAAA 149
||.|||.|.||.||..|.||||||||.|||.|.||.||.||.||.||.||
RBAM_000190__ 100 GGGTTTCATACCTCACTCGAGGAAGTGGATGAAAACCCTTATTTAGAGAA 149
BSNT_00031___ 150 GTTCTATCATGATTTTGAACGTTGGAGCTTTCACCTTCAAATTTACTTCT 199
|||.|||||.||||||||||||||||||||.||..|.||||||||.||..
RBAM_000190__ 150 GTTTTATCACGATTTTGAACGTTGGAGCTTCCATTTACAAATTTATTTTC 199
BSNT_00031___ 200 TAGCTGAACGCTTCAAAGAACAGAAAACAATTTTTGAAGCCGGCGGAGGT 249
|.|||||.||.||||||||.|||||||..||.||||||.|.|||||.||.
RBAM_000190__ 200 TGGCTGAGCGGTTCAAAGAGCAGAAAAACATGTTTGAATCAGGCGGCGGA 249
BSNT_00031___ 250 TTTGTACAGGATCGTTCGATTTATGAAGATACAGGAATTTTCGCAAAAAT 299
||.||.|||||.|||||||||||||||||||||||.||.|||||||||||
RBAM_000190__ 250 TTCGTGCAGGACCGTTCGATTTATGAAGATACAGGCATATTCGCAAAAAT 299
BSNT_00031___ 300 GCATGCTGATAAAGGGACAATGTCAAAGGTT----GATTATAAGACTTAC 345
||||||.||||||||.||.||||| |.| |||||.|..||.|||
RBAM_000190__ 300 GCATGCCGATAAAGGAACCATGTC----GCTGACAGATTACACAACATAC 345
BSNT_00031___ 346 ACAAGCCTTTTCGAAGCAATGGTAATGACACCGTATTTCCCACACCCAGA 395
||||||||.||.||.||.|||||.|||||.|||||.|||||.||.||.||
RBAM_000190__ 346 ACAAGCCTATTTGAGGCGATGGTCATGACGCCGTACTTCCCGCATCCTGA 395
BSNT_00031___ 396 TGTGTTGATCTATTTAGAAGGAGATCTGGAGAACATTTTAAACCGGATTG 445
|||.|||||||||||||||||.||.||.||.||||||.||||||||||||
RBAM_000190__ 396 TGTTTTGATCTATTTAGAAGGCGACCTTGAAAACATTATAAACCGGATTG 445
BSNT_00031___ 446 AACAACGCGGCCGTGAGATGGAGCTTCAGACAAGCAGGTCTTATTGGGAA 495
||.|.||.|||||.|||||||||||.|||||||.|.|.||||||||||||
RBAM_000190__ 446 AAAAGCGGGGCCGCGAGATGGAGCTGCAGACAAACCGCTCTTATTGGGAA 495
BSNT_00031___ 496 GAAATGCATACACGCTACGAGAACTGGATAAGCGGTTTTAATGCCTGCCC 545
||.|||.|||||||.|||||..|||||||.|||||||||||.||||||||
RBAM_000190__ 496 GAGATGTATACACGGTACGAAGACTGGATCAGCGGTTTTAACGCCTGCCC 545
BSNT_00031___ 546 TGTTTTAAAACTTCGCATTGAAGATTATGATCTTCTGAA--CGACGAAAA 593
|||..|.|||.|.|||||||||||||||||.|| |||| .||.|||.|
RBAM_000190__ 546 TGTGCTGAAAGTGCGCATTGAAGATTATGACCT--TGAAGCTGATGAACA 593
BSNT_00031___ 594 CTCGATTGAAAATATTG-TAGATCAAATTGCTTCAGTTATTCATGATAAT 642
.|| |.||.||...||| |.||..||| |||||.| |.||||.|.
RBAM_000190__ 594 GTC-ACTGGAACCTTTGATCGAAAAAA-----TCAGTCA--CGTGATCAA 635
BSNT_00031___ 643 CAAAAAAAGTGA------- 654
|.||||.||..|
RBAM_000190__ 636 CGAAAACAGAAATAAATAA 654
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