Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00025 and RBAM_000150

See Amino acid alignment / Visit BSNT_00025 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:47
# Commandline: needle
#    -asequence dna-align/BSNT_00025___yaaE.1.9828.seq
#    -bsequence dna-align/RBAM_000150___pdxT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00025___yaaE-RBAM_000150___pdxT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00025___yaaE-RBAM_000150___pdxT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00025___yaaE
# 2: RBAM_000150___pdxT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity:     467/594 (78.6%)
# Similarity:   467/594 (78.6%)
# Gaps:           6/594 ( 1.0%)
# Score: 1810.0
# 
#
#=======================================

BSNT_00025___      1 ATGTTAACAATAGGTGTACTAGGACTTCAAGGAGCAGTTAGAGAGCACAT     50
                     |||||||||||.||||||||.|||||||||||||||||.|||||.||.||
RBAM_000150__      1 ATGTTAACAATTGGTGTACTTGGACTTCAAGGAGCAGTAAGAGAACATAT     50

BSNT_00025___     51 CCATGCGATTGAAGCATGCGGCGCGGCTGGTCTTGTCGTAAAACGTCCGG    100
                     .|.|.|.|||||||||||.||..|....|||.|.|||.|.||.|||||.|
RBAM_000150__     51 TCGTTCAATTGAAGCATGTGGTTCAAAAGGTGTCGTCATTAAGCGTCCTG    100

BSNT_00025___    101 AGCAGCTGAACGAAGTTGACGGGTTGATTTTGCCGGGCGGTGAGAGCACG    150
                     |.||||||.|.||..|.|||||.||.||..||||||||||.||.||||||
RBAM_000150__    101 AACAGCTGGATGACATCGACGGCTTAATCCTGCCGGGCGGGGAAAGCACG    150

BSNT_00025___    151 ACGATGCGCCGTTTGATCGATACGTATCAATTCATGGAGCCGCTTCGTGA    200
                     ||||||||.|||||.||.|||||||||||.||.||||||||||||||.||
RBAM_000150__    151 ACGATGCGGCGTTTAATGGATACGTATCATTTTATGGAGCCGCTTCGCGA    200

BSNT_00025___    201 ATTCGCTGCTCAGGGCAAACCGATGTTTGGAACATGTGCCGGATTAATTA    250
                     .||.||.||.||.|||||.||||||||.||.|||||.|||||..|.||||
RBAM_000150__    201 GTTTGCCGCCCAAGGCAAGCCGATGTTCGGCACATGCGCCGGTCTGATTA    250

BSNT_00025___    251 TATTAGCAAAAGAAATTGCCGGTTCAGATAATCCTCATTTAGGTCTTCTG    300
                     |.|||||.|||||.||.||.||..|.|||||..||||||||||.||..||
RBAM_000150__    251 TTTTAGCCAAAGAGATAGCGGGAACGGATAACGCTCATTTAGGGCTGTTG    300

BSNT_00025___    301 AATGTGGTTGTAGAACGTAATTCATTTGGCCGGCAGGTTGACAGCTTTGA    350
                     ||.||.||.||.||.||||||||.|||||.||.|||||.|||||||||||
RBAM_000150__    301 AACGTTGTCGTCGAGCGTAATTCCTTTGGACGTCAGGTCGACAGCTTTGA    350

BSNT_00025___    351 AGCTGATTTAACAATTAAAGGCTTGGACGAGCCTTTTACTGGGGTATTCA    400
                     |||||||.|.||.|||||||||.|.||.|||||.|||||.||.|||||.|
RBAM_000150__    351 AGCTGATCTGACGATTAAAGGCCTTGATGAGCCGTTTACGGGTGTATTTA    400

BSNT_00025___    401 TCCGTGCTCCGCATATTTTAGAAGCTGGTGAAAATGTTGAAGTTCTATCG    450
                     |.||.||.|||||||||||||||||.||.|||.||||||||||.||.|..
RBAM_000150__    401 TTCGCGCGCCGCATATTTTAGAAGCCGGAGAAGATGTTGAAGTGCTTTGT    450

BSNT_00025___    451 GAGCATAATGGTCGTATTGTAGCCGCGAAACAGGGGCAATTCCTTGGCTG    500
                     ||||||||.||.||.||.||.||.||.||.||||||.|.|||||.|||||
RBAM_000150__    451 GAGCATAACGGACGCATCGTGGCTGCAAAGCAGGGGAATTTCCTCGGCTG    500

BSNT_00025___    501 CTCATTCCATCCGGAGCTGACAGAAGATCACCGAGTGACGCAGCTGTTTG    550
                     |||.||||||||.||.|||||.||.||||||||.|||||..|||||||||
RBAM_000150__    501 CTCGTTCCATCCTGAACTGACGGATGATCACCGGGTGACAGAGCTGTTTG    550

BSNT_00025___    551 TTGAA-ATGGTTGAGGAATATAAGCA--AAAGGCACTTGTATAA    591
                      |||| ||||..||..|..|||||||  |||  ||..|||||||
RBAM_000150__    551 -TGAAGATGGCGGAAAAGCATAAGCAGGAAA--CAGCTGTATAA    591


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