Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00023 and RBAM_000130
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00023___dacA.1.9828.seq
# -bsequence dna-align/RBAM_000130___dacA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00023___dacA-RBAM_000130___dacA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00023___dacA-RBAM_000130___dacA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00023___dacA
# 2: RBAM_000130___dacA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1363
# Identity: 1019/1363 (74.8%)
# Similarity: 1019/1363 (74.8%)
# Gaps: 62/1363 ( 4.5%)
# Score: 3774.5
#
#
#=======================================
BSNT_00023___ 1 TTGAACATCAAGAAATGTAAACAGCTACTGATGTCATTGGTTGTGTTAAC 50
||||||||||.||||||.||||||||..||.|||||||.||.|| ||
RBAM_000130__ 1 TTGAACATCACGAAATGGAAACAGCTGTTGGTGTCATTAGTGGT----AC 46
BSNT_00023___ 51 T----CTAGCTGTCACGTGTCTGGCTCCAATGTCAAAAGCAAAAGCAGCC 96
| ||.||.|..||.||..|.|.|||.|||||.|||||..|.||||||
RBAM_000130__ 47 TGGCACTGGCCGCAACTTGCTTTGTTCCGATGTCTAAAGCGGAGGCAGCC 96
BSNT_00023___ 97 AGC---GATCCAATTGATATCAATGCATCTGCTGCTATTATGATCGAAGC 143
.|| ||.||.||||||.||||.|||||.|||||.||.|||||.||.||
RBAM_000130__ 97 GGCAATGACCCGATTGATGTCAACGCATCAGCTGCGATAATGATTGAGGC 146
BSNT_00023___ 144 TTCTTCAGGTAAAATTCTTTACAGTAAAAATGCAGATAAGAGACTGCCAA 193
|||.||.||.||||||.|.|||||||||||||||||.||.||||||||.|
RBAM_000130__ 147 TTCATCGGGAAAAATTTTATACAGTAAAAATGCAGACAAAAGACTGCCGA 196
BSNT_00023___ 194 TTGCGAGTATGACAAAAATGATGACAGAGTATCTGTTATTAGAAGCAATT 243
||||.||.|||||||||||||||||.||.||||||.|..|.|||||.|||
RBAM_000130__ 197 TTGCCAGCATGACAAAAATGATGACTGAATATCTGCTTCTGGAAGCCATT 246
BSNT_00023___ 244 GATCAAGGTAAAGTGAAATGGGACCAAACCTATACGCCTGATGACTATGT 293
.|..||||.||||||||||||||.|||||.|||||.||||||||.|||||
RBAM_000130__ 247 AAAGAAGGAAAAGTGAAATGGGATCAAACGTATACTCCTGATGATTATGT 296
BSNT_00023___ 294 GTATGAAATTTCCCAAGATAACAGCTTATCAAACGTTCCTCTTCGGAAAG 343
.|||||||||||.|||||.|||||.|||||||||||.||.|||||.||||
RBAM_000130__ 297 CTATGAAATTTCTCAAGACAACAGTTTATCAAACGTCCCCCTTCGAAAAG 346
BSNT_00023___ 344 ACGGGAAATACACAGTAAAAGAATTATATCAAGCTACAGCAATTTATTCT 393
||||.||||||||.||.||||||.|.|||||.||||..||.|||||.|||
RBAM_000130__ 347 ACGGCAAATACACGGTTAAAGAACTGTATCAGGCTATGGCGATTTACTCT 396
BSNT_00023___ 394 GCAAATGCTGCTGCTATTGCGATTGCAGAAATCGTTGCCGGTTCTGAAAC 443
||.||.|..||.||.|||||..||||.|||||..|||||||..|||||||
RBAM_000130__ 397 GCCAACGGAGCCGCGATTGCAGTTGCCGAAATTCTTGCCGGAACTGAAAC 446
BSNT_00023___ 444 TAAGTTTGTTGAAAAAATGAATGCAAAAGCAAAAGAACTAGGCTTAACAG 493
.||.|||||.|...||||||||||.|||||.||||||.|||||.|.|||.
RBAM_000130__ 447 GAAATTTGTCGCTGAAATGAATGCGAAAGCCAAAGAATTAGGCATGACAA 496
BSNT_00023___ 494 ATTACAAATTTGTTAACGCAACAGGTCTTGAAAACAAAGATCTTCACGGG 543
|.||..|.|||...||.||.|||||.||||..||..||||.||||||||.
RBAM_000130__ 497 ACTATGATTTTAAAAATGCCACAGGGCTTGTGAATGAAGACCTTCACGGC 546
BSNT_00023___ 544 CATCAGCCTG--AGGGGACAAGCGTAAATGAAGAAAGTGAAGTTTCTGCA 591
.|.||||| | |||.|| |.||||.||.|||||.||||||||||||||.
RBAM_000130__ 547 AAGCAGCC-GCAAGGAGA-AGGCGTTAAAGAAGAGAGTGAAGTTTCTGCT 594
BSNT_00023___ 592 AAGGATATGGCCATTCTTGCGGATCACCTGATTACTGACTACCCTGAGAT 641
||.||.|||||..|||||||.||.|.||||||.|||||.||.||.||..|
RBAM_000130__ 595 AAAGACATGGCGCTTCTTGCAGACCGCCTGATCACTGATTATCCGGAAGT 644
BSNT_00023___ 642 ACTGGAGACTTCCAGTATCGCCAAAACGAAATTCAGAGAAGGCACCGATG 691
.||..|.||..|.||.|||||.||.|||||||||||||..|||||.||||
RBAM_000130__ 645 TCTCAAAACAACAAGCATCGCTAAGACGAAATTCAGAGCCGGCACTGATG 694
BSNT_00023___ 692 ATGAAATGGACATGCCGAACTGGAATTTTATGCTGAAGGGGCTTG--TCA 739
|||||||||||||||||||||||||.||.|||.|.||.||.|||| ||.
RBAM_000130__ 695 ATGAAATGGACATGCCGAACTGGAACTTCATGTTAAAAGGTCTTGTTTCT 744
BSNT_00023___ 740 GCGAGTATAAAAAAGCGACT---GTAGACGGACTGAAAACAGGTTCTACT 786
| ||.|.| || ||.|||||..|.|||||.|||||||||
RBAM_000130__ 745 G---------AATACC--CTGGCGTTGACGGCTTAAAAACGGGTTCTACT 783
BSNT_00023___ 787 GACTCTGCGGGTTCATGCTTTACAGGAACAGCTGAACGCAACGGTATGCG 836
||.||||||||.||.||.||||||.|.|||||..|.||.|||||.|||||
RBAM_000130__ 784 GATTCTGCGGGATCTTGTTTTACAAGCACAGCACAGCGGAACGGAATGCG 833
BSNT_00023___ 837 TGTCATCACTGTTGTATTATACGCAAAGGGCAACCTTCATACAGGCCGTT 886
.||||||||.|||||||||.|||||||.||||||||.|||||.||.||||
RBAM_000130__ 834 GGTCATCACCGTTGTATTAAACGCAAAAGGCAACCTGCATACCGGACGTT 883
BSNT_00023___ 887 TCGATGAAACGAAGAAAATGTTTGATTATGCTTT---CGACAATTTCTCC 933
|.|||||||||||.||||||.|.|||||.||.|| |..|||||||||.
RBAM_000130__ 884 TTGATGAAACGAAAAAAATGCTCGATTACGCATTTAACAGCAATTTCTCA 933
BSNT_00023___ 934 ATGAAAGAAATTTATGCTGAAGGCGATCAAGTAAAAGGCCATAAAACAGT 983
||||||||..||||..||||||||..||||||||||||.||.||||| |.
RBAM_000130__ 934 ATGAAAGATCTTTACCCTGAAGGCTCTCAAGTAAAAGGGCACAAAAC-GA 982
BSNT_00023___ 984 TTCA-GTTGATAAGGGTAAAGAGAAAGAAGTAGGCATTGTGACAAACAAG 1032
||.| |||||.||.||.|||||.||..||||.|..|||||.||..|||||
RBAM_000130__ 983 TTGACGTTGAAAAAGGGAAAGACAAGCAAGTCGATATTGTTACTGACAAG 1032
BSNT_00023___ 1033 GCGTTCTCTCTTCCTGTCAAAAATGGTGAGGAAAAGAATTACAAAG-CGA 1081
|||.|.|||.|||||||.||||..||.||.||||||||.||.|||| |||
RBAM_000130__ 1033 GCGCTTTCTATTCCTGTGAAAAGCGGGGATGAAAAGAACTATAAAGCCGA 1082
BSNT_00023___ 1082 AGGTCACACTGAATAAAGATAACTTAACTGCTCCTGTGAAAAAAGGAACC 1131
| ||.||..|..|||||.|..|..|.||.||||||||||||||.|||||.
RBAM_000130__ 1083 A-GTGACTTTAGATAAAAAAGAAATCACGGCTCCTGTGAAAAAGGGAACG 1131
BSNT_00023___ 1132 AAGGTTGGGAAGCTGACTGCGGAATACACAGGTGATGAAAAGGATTACGG 1181
||.||.||.|.||||||.|....|||||.|||...|||.||.||.||.||
RBAM_000130__ 1132 AAAGTCGGAACGCTGACAGTTACATACAAAGGCAGTGACAAAGACTATGG 1181
BSNT_00023___ 1182 ATTCCTTAA------------CAGCGATCTGGCTGGTGTAGACCTTGTTA 1219
.|||||.|| |||| ||..|.|||||.|
RBAM_000130__ 1182 CTTCCTCAAATCCAAAGAGTTCAGC------------GTGAATCTTGTAA 1219
BSNT_00023___ 1220 CAAAAGAAAATGTAGAAAAAGCAAACTGGTTTGTTTTGACAATGCGCAGT 1269
|.|||.|..|||||||.||||||||||||||||||..||..||||||.|.
RBAM_000130__ 1220 CGAAAAATGATGTAGATAAAGCAAACTGGTTTGTTCAGATGATGCGCGGC 1269
BSNT_00023___ 1270 ATCGGCGGATTTTTTGCCGGAATTTGGGGAAGCATTGTTGATACGGTAAC 1319
|||||||||||.||..||||.||.|||...|||...|||||.||||||||
RBAM_000130__ 1270 ATCGGCGGATTCTTCTCCGGTATCTGGAACAGCGCCGTTGACACGGTAAC 1319
BSNT_00023___ 1320 CGGCTGGTTTTAA 1332
.||||||||||||
RBAM_000130__ 1320 AGGCTGGTTTTAA 1332
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