Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00001 and RBAM_000010
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:46
# Commandline: needle
# -asequence dna-align/BSNT_00001___dnaA.1.9828.seq
# -bsequence dna-align/RBAM_000010___dnaA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00001___dnaA-RBAM_000010___dnaA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00001___dnaA-RBAM_000010___dnaA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00001___dnaA
# 2: RBAM_000010___dnaA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1342
# Identity: 1129/1342 (84.1%)
# Similarity: 1129/1342 (84.1%)
# Gaps: 2/1342 ( 0.1%)
# Score: 4781.0
#
#
#=======================================
BSNT_00001___ 1 ATGGAAAATATATTAGACCTGTGGAACCAAGCCCTTGCTCAAATCGAAAA 50
|||||.||||||||.||.||.|||||.|||||.||.||||||||.||.||
RBAM_000010__ 1 ATGGAGAATATATTGGATCTTTGGAATCAAGCTCTAGCTCAAATTGAGAA 50
BSNT_00001___ 51 AAAGTTGAGCAAACCGAGTTTTGAGACTTGGATGAAGTCAACCAAAGCCC 100
||||.|.||||||||||||||.||.||||||||||||||.||.|||||||
RBAM_000010__ 51 AAAGCTAAGCAAACCGAGTTTCGAAACTTGGATGAAGTCGACGAAAGCCC 100
BSNT_00001___ 101 ACTCACTGCAAGGCGATACATTAACGATCACGGCTCCCAATGAATTTGCC 150
|.||.||||||||.|||||.|||||.|||||.||||||||||||||||||
RBAM_000010__ 101 ATTCGCTGCAAGGGGATACCTTAACCATCACCGCTCCCAATGAATTTGCC 150
BSNT_00001___ 151 AGAGACTGGCTGGAGTCCAGATACTTGCATCTGATTGCAGATACTATATA 200
||||||||||||||||||||.|||||.|||||.|||||||||||.|||||
RBAM_000010__ 151 AGAGACTGGCTGGAGTCCAGGTACTTACATCTCATTGCAGATACCATATA 200
BSNT_00001___ 201 TGAATTAACCGGGGAAGAATTGAGCATTAAGTTTGTCATTCCTCAAAATC 250
.||||||||||||||||||||||||.|.||.|||||||||||||||||||
RBAM_000010__ 201 CGAATTAACCGGGGAAGAATTGAGCGTCAAATTTGTCATTCCTCAAAATC 250
BSNT_00001___ 251 AAGATGTTGAGGACTTTATGCCGAAACCGCAAGTCAAAAAAGCGGTCAAA 300
|.||.|..||..|||||.|.||||||||||||||.||||||||||..|||
RBAM_000010__ 251 AGGACGAAGAAAACTTTTTACCGAAACCGCAAGTGAAAAAAGCGGCAAAA 300
BSNT_00001___ 301 GAAGATACATCTGATTTTCCTCAAAATATGCTCAATCCAAAATATACTTT 350
||.||..|.|||||||||||.||||..||||||||.||.||||||||.||
RBAM_000010__ 301 GAGGAACCGTCTGATTTTCCCCAAAGCATGCTCAACCCGAAATATACATT 350
BSNT_00001___ 351 TGATACTTTTGTCATCGGATCTGGAAACCGATTTGCACACGCTGCTTCCC 400
.||.||.||.|||||||||||.|||||||||||.||.||.||.||.||.|
RBAM_000010__ 351 CGACACATTCGTCATCGGATCGGGAAACCGATTCGCCCATGCAGCATCAC 400
BSNT_00001___ 401 TCGCAGTAGCGGAAGCACCCGCGAAAGCTTACAACCCTTTATTTATCTAT 450
|.||.||.||||||||||||||.|||||.|||||||||||||||||.||.
RBAM_000010__ 401 TGGCTGTGGCGGAAGCACCCGCTAAAGCGTACAACCCTTTATTTATATAC 450
BSNT_00001___ 451 GGGGGCGTCGGCTTAGGGAAAACGCACTTAATGCATGCGATCGGCCATTA 500
|||||.|||||||||||.|||||.|||||||||||.||||||||||||||
RBAM_000010__ 451 GGGGGAGTCGGCTTAGGAAAAACCCACTTAATGCACGCGATCGGCCATTA 500
BSNT_00001___ 501 TGTAATAGATCATAATCCTTCTGCCAAAGTGGTTTATCTGTCTTCTGAGA 550
|||.||.||||||||||||||.|||||||||||.||.|||||||||||.|
RBAM_000010__ 501 TGTCATTGATCATAATCCTTCAGCCAAAGTGGTGTACCTGTCTTCTGAAA 550
BSNT_00001___ 551 AATTTACAAACGAATTCATCAACTCTATCCGAGATAATAAAGCCGTCGAC 600
||||.|||||.||||||||||||||.|||||.||||||||||||||.||.
RBAM_000010__ 551 AATTCACAAATGAATTCATCAACTCAATCCGCGATAATAAAGCCGTTGAT 600
BSNT_00001___ 601 TTCCGCAATCGCTATCGAAATGTTGATGTGCTTTTGATAGATGATATTCA 650
||||||||.|||||.||.||.||||||||.||||||||||||||||||||
RBAM_000010__ 601 TTCCGCAACCGCTACCGGAACGTTGATGTACTTTTGATAGATGATATTCA 650
BSNT_00001___ 651 ATTTTTAGCGGGGAAAGAACAAACCCAGGAAGAATTTTTCCATACATTTA 700
|||||||||.||.|||||||||||.||||||||.||||||||||||||.|
RBAM_000010__ 651 ATTTTTAGCCGGAAAAGAACAAACACAGGAAGAGTTTTTCCATACATTCA 700
BSNT_00001___ 701 ACACATTGCACGAAGAAAGCAAACAAATCGTCATTTCAAGTGACCGACCG 750
||||..|.||.||||||||||||||||||||.|||||.||.|||.|||||
RBAM_000010__ 701 ACACGCTTCATGAAGAAAGCAAACAAATCGTGATTTCCAGCGACAGACCG 750
BSNT_00001___ 751 CCAAAGGAAATTCCGACACTTGAGGACAGATTGCGCTCTCGTTTTGAATG 800
||.||.||.||.|||||.|||||.|||.|..||||.||.||.||.|||||
RBAM_000010__ 751 CCGAAAGAGATCCCGACCCTTGAAGACCGCCTGCGTTCGCGGTTCGAATG 800
BSNT_00001___ 801 GGGACTTATTACAGATATCACACCGCCTGATCTAGAAACGAGAATTGCAA 850
||||.|.|||||.||||||||||||||.|||||.||||||.|.|||||.|
RBAM_000010__ 801 GGGATTGATTACGGATATCACACCGCCGGATCTGGAAACGCGGATTGCCA 850
BSNT_00001___ 851 TTTTAAGAAAAAAAGCCAAAGCAGAAGGCCTCGATATTCCGAACGAGGTT 900
|..|.|||||||||||.||.||.|||||.||.|||||||||||||||||.
RBAM_000010__ 851 TCCTGAGAAAAAAAGCGAAGGCGGAAGGTCTTGATATTCCGAACGAGGTC 900
BSNT_00001___ 901 ATGCTTTACATCGCGAATCAAATCGACAGCAATATTCGGGAACTCGAAGG 950
||||||||||||||||||||.||.||||||||.||.||.|||||.|||||
RBAM_000010__ 901 ATGCTTTACATCGCGAATCAGATTGACAGCAACATCCGCGAACTGGAAGG 950
BSNT_00001___ 951 AGCATTAATCAGAGTTGTCGCTTATTCATCTTTAATTAATAAAGATATTA 1000
.|||||||||.|.||||||||.||||||||.|||||.||||||||.||||
RBAM_000010__ 951 GGCATTAATCCGGGTTGTCGCCTATTCATCCTTAATCAATAAAGACATTA 1000
BSNT_00001___ 1001 ATGCTGATCTGGCCGCTGAGGCGTTGAAAGATATTATTCCTTCCTCAAAA 1050
|.||.||.|||||.||.||.||.|||||||||||||||||.||.||.||.
RBAM_000010__ 1001 ACGCAGACCTGGCTGCAGAAGCATTGAAAGATATTATTCCGTCTTCTAAG 1050
BSNT_00001___ 1051 CCGAAAGTCATTACGATAAAAGAAATTCAGAGGGTAGTAGGCCAGCAATT 1100
|||||.|||||||||||||||||.||||||.||.|.||.||.|||||.||
RBAM_000010__ 1051 CCGAAGGTCATTACGATAAAAGAGATTCAGCGGATTGTCGGACAGCAGTT 1100
BSNT_00001___ 1101 TAATATTAAACTCGAGGATTTCAAAGCAAAAAAACGGACAAAGTCAGTAG 1150
.||.|||||.||.||.|||||||||||.|||||.||.||.||.||.||.|
RBAM_000010__ 1101 CAACATTAAGCTTGAAGATTTCAAAGCGAAAAAGCGCACGAAATCCGTGG 1150
BSNT_00001___ 1151 CTTTTCCGCGTCAAATCGCCATGTA-CTTATCAAGGGAAATGACTGATTC 1199
|.||.||..|.|||||.||.||||| ||| |||||.||||||||.|||||
RBAM_000010__ 1151 CGTTCCCAAGACAAATTGCGATGTATCTT-TCAAGAGAAATGACGGATTC 1199
BSNT_00001___ 1200 CTCTCTTCCTAAAATCGGTGAAGAGTTTGGAGGACGTGATCATACGACCG 1249
.|||.|.|||||||||||.|||||.|||||.||..|.||.|||||.||||
RBAM_000010__ 1200 TTCTTTGCCTAAAATCGGGGAAGAATTTGGCGGCAGAGACCATACAACCG 1249
BSNT_00001___ 1250 TTATTCATGCGCATGAAAAAATTTCGAAACTGCTGGCAGATGATGAACAG 1299
|.|||||.||.||||||||.|||||.|||||||||...|||||.||.|||
RBAM_000010__ 1250 TCATTCACGCCCATGAAAAGATTTCAAAACTGCTGATTGATGACGAGCAG 1299
BSNT_00001___ 1300 CTTCAGCAGCATGTAAAAGAAATTAAAGAACAGCTTAAATAG 1341
|||||||||||.||.||||||||.|||||||.|||||||||.
RBAM_000010__ 1300 CTTCAGCAGCAGGTGAAAGAAATAAAAGAACTGCTTAAATAA 1341
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