Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_06291 and BSU41040

See Amino acid alignment / Visit BSNT_06291 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:59
# Commandline: needle
#    -asequence dna-align/BSNT_06291___spoIIIJ.1.22522.seq
#    -bsequence dna-align/BSU41040___spoIIIJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06291___spoIIIJ-BSU41040___spoIIIJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06291___spoIIIJ-BSU41040___spoIIIJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06291___spoIIIJ
# 2: BSU41040___spoIIIJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 786
# Identity:     779/786 (99.1%)
# Similarity:   779/786 (99.1%)
# Gaps:           3/786 ( 0.4%)
# Score: 3879.0
# 
#
#=======================================

BSNT_06291___      1 ---TTGTTGAAAAGGAGAATAGGGTTGCTATTAAGTATGGTTGGCGTATT     47
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp      1 ATGTTGTTGAAAAGGAGAATAGGGTTGCTATTAAGTATGGTTGGCGTATT     50

BSNT_06291___     48 CATGCTTTTGGCTGGATGCTCGAGTGTGAAAGAGCCGATTACTGCAGATA     97
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU41040___sp     51 CATGCTTTTGGCTGGATGCTCGAGTGTGAAAGAGCCGATCACTGCAGATA    100

BSNT_06291___     98 GTCCGCATTTCTGGGACAAGTACGTAGTATATCCATTGTCTGAGCTCATT    147
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    101 GTCCGCATTTCTGGGACAAGTACGTAGTATATCCATTGTCTGAGCTCATT    150

BSNT_06291___    148 ACGTATGTAGCGAAATTGACGGGAGATAACTACGGGCTTTCAATTATTCT    197
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    151 ACGTATGTAGCGAAATTGACGGGAGATAACTACGGGCTTTCAATTATTCT    200

BSNT_06291___    198 AGTTACCATTTTAATTCGTTTATTAATTTTACCGCTGATGATTAAGCAGC    247
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    201 AGTTACCATTTTAATTCGTTTATTAATTTTACCGCTGATGATTAAGCAGC    250

BSNT_06291___    248 TGAGAAGTTCGAAAGCGATGCAGGCTTTACAGCCGGAAATGCAAAAGCTT    297
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    251 TGAGAAGTTCGAAAGCGATGCAGGCTTTACAGCCGGAAATGCAAAAGCTT    300

BSNT_06291___    298 AAAGAAAAATACAGCTCAAAGGATCAAAAAACGCAGCAAAAGCTTCAGCA    347
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU41040___sp    301 AAAGAAAAATACAGCTCAAAGGATCAAAAAACGCAGCAAAAGCTTCAACA    350

BSNT_06291___    348 GGAAACAATGGCTTTATTCCAAAAGCATGGTGTCAATCCATTGGCGGGAT    397
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    351 GGAAACAATGGCTTTATTCCAAAAGCATGGTGTCAATCCATTGGCGGGAT    400

BSNT_06291___    398 GTTTCCCGATTTTGATCCAGATGCCGATTTTAATTGGATTCTATCATGCG    447
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    401 GTTTCCCGATTTTGATCCAGATGCCGATTTTAATTGGATTCTATCATGCG    450

BSNT_06291___    448 ATCATGAGAACCCAGGCGATTTCAGAGCATAGCTTCTTATGGTTTGACTT    497
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    451 ATCATGAGAACCCAGGCGATTTCAGAGCATAGCTTCTTATGGTTTGACTT    500

BSNT_06291___    498 AGGAGAAAAAGATCCTTACTATATTCTTCCTATCGTTGCCGGTGTCGCTA    547
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    501 AGGAGAAAAAGATCCTTACTATATTCTTCCTATCGTTGCCGGTGTCGCTA    550

BSNT_06291___    548 CATTTGTTCAGCAAAAACTGATGATGGCGGGCAATGCGCAGCAAAATCCG    597
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU41040___sp    551 CATTTGTTCAGCAAAAACTGATGATGGCTGGCAATGCGCAGCAAAATCCG    600

BSNT_06291___    598 CAAATGGCGATGATGCTTTGGATTATGCCAATTATGATTATCGTATTTGC    647
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    601 CAAATGGCGATGATGCTTTGGATTATGCCAATTATGATTATCGTATTTGC    650

BSNT_06291___    648 GATCAACTTCCCGGCGGCTCTTTCTCTTTATTGGGTAGTCGGTAACTTGT    697
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU41040___sp    651 GATCAACTTCCCGGCGGCTCTTTCTCTTTATTGGGTAGTTGGTAACTTGT    700

BSNT_06291___    698 TTATGATTGCGCAAACTTTCCTCATTAAAGGACCTGATATTAAAAAAAAT    747
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41040___sp    701 TTATGATTGCGCAAACTTTCCTCATTAAAGGACCTGATATTAAAAAAAAT    750

BSNT_06291___    748 CCTGAGCCGCAAAAAGCCGGAGGAAAGAAAAAGTGA    783
                     ||||||||||||||||||||||||||||||||||||
BSU41040___sp    751 CCTGAGCCGCAAAAAGCCGGAGGAAAGAAAAAGTGA    786


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_06291 and BSU41040

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
