Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06283 and BSU40990

See Amino acid alignment / Visit BSNT_06283 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence dna-align/BSNT_06283___yyaA.1.22522.seq
#    -bsequence dna-align/BSU40990___noc.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06283___yyaA-BSU40990___noc.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06283___yyaA-BSU40990___noc.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06283___yyaA
# 2: BSU40990___noc
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 852
# Identity:     849/852 (99.6%)
# Similarity:   849/852 (99.6%)
# Gaps:           0/852 ( 0.0%)
# Score: 4233.0
# 
#
#=======================================

BSNT_06283___      1 ATGAAGCATTCATTCTCTCGTTTCTTCGGGCTTGGTGAGAAGGAACAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no      1 ATGAAGCATTCATTCTCTCGTTTCTTCGGGCTTGGTGAGAAGGAACAGGA     50

BSNT_06283___     51 GCCGGAGATTGCTGAACATGATACAAACAAAGAAGAGATTCTGGAAATAC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no     51 GCCGGAGATTGCTGAACATGATACAAACAAAGAAGAGATTCTGGAAATAC    100

BSNT_06283___    101 CGGTAAATGCTATCGTTCCCAACCGTTTTCAGCCACGCACCATTTTCTCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    101 CGGTAAATGCTATCGTTCCCAACCGTTTTCAGCCACGCACCATTTTCTCA    150

BSNT_06283___    151 GATGAAAAAATCAAAGAGTTAGCAATGACCATTCATACACACGGCATTAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    151 GATGAAAAAATCAAAGAGTTAGCAATGACCATTCATACACACGGCATTAT    200

BSNT_06283___    201 TCAGCCGATTGTTGTTAGGCATACAGAAGAAGAAGGCCAATACGAACTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    201 TCAGCCGATTGTTGTTAGGCATACAGAAGAAGAAGGCCAATACGAACTCA    250

BSNT_06283___    251 TTGCAGGTGAAAGACGCTGGAGAGCGGTGCAATCGCTTGAGTGGGAAAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    251 TTGCAGGTGAAAGACGCTGGAGAGCGGTGCAATCGCTTGAGTGGGAAAAG    300

BSNT_06283___    301 ATTCCGGCAATTATTAAGGATTTTTCCGACACGGAAACCGCTTCTGTGGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    301 ATTCCGGCAATTATTAAGGATTTTTCCGACACGGAAACCGCTTCTGTGGC    350

BSNT_06283___    351 GTTAATCGAGAACTTGCAGCGGGAAGAACTGTCTTCTATTGAGGAAGCGC    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40990___no    351 GTTAATCGAAAACTTGCAGCGGGAAGAACTGTCTTCTATTGAGGAAGCGC    400

BSNT_06283___    401 ATGCTTATGCTAGGCTGCTTGAGCTGCATGATTTAACACAGGAGGCACTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    401 ATGCTTATGCTAGGCTGCTTGAGCTGCATGATTTAACACAGGAGGCACTC    450

BSNT_06283___    451 GCACAGCGCTTAGGAAAAGGGCAGTCTACAATCGCGAATAAGCTTCGGTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    451 GCACAGCGCTTAGGAAAAGGGCAGTCTACAATCGCGAATAAGCTTCGGTT    500

BSNT_06283___    501 ATTAAAGCTGCCTCAGCCGGTCCAAGAGGCGATTATGGAGAAGAAAATCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    501 ATTAAAGCTGCCTCAGCCGGTCCAAGAGGCGATTATGGAGAAGAAAATCA    550

BSNT_06283___    551 CCGAGCGCCATGCCAGAGCGCTGATTCCGCTGAAACAGCCTGAGCTCCAA    600
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU40990___no    551 CCGAGCGCCATGCCAGAGCACTGATTCCGCTGAAACAGCCTGAGCTCCAA    600

BSNT_06283___    601 GTCACACTGCTCACAGAGATTATTGAGAAAAGTTTAAATGTAAAGCAGAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    601 GTCACACTGCTCACAGAGATTATTGAGAAAAGTTTAAATGTAAAGCAGAC    650

BSNT_06283___    651 GGAAGACCGCGTGGTGAAAATGCTGGAGCAAGGCCAGAGAAAGCCAAAGC    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    651 AGAAGACCGCGTGGTGAAAATGCTGGAGCAAGGCCAGAGAAAGCCAAAGC    700

BSNT_06283___    701 CGAGACGCAAAGCATTCAGCAGAGATACAAGAATTGCGATGAACACGATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    701 CGAGACGCAAAGCATTCAGCAGAGATACAAGAATTGCGATGAACACGATT    750

BSNT_06283___    751 CGCCAGTCACTATCAATGGTGGAAGACAGCGGTGTAAAATTGAATACGGA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    751 CGCCAGTCACTATCAATGGTGGAAGACAGCGGTGTAAAATTGAATACGGA    800

BSNT_06283___    801 AGAAGAAGAATTTGAAGAATATATTCAATTAACGATTCGCATACCAAAAT    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40990___no    801 AGAAGAAGAATTTGAAGAATATATTCAATTAACGATTCGCATACCAAAAT    850

BSNT_06283___    851 AG    852
                     ||
BSU40990___no    851 AG    852


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