Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06282 and BSU40980

See Amino acid alignment / Visit BSNT_06282 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence dna-align/BSNT_06282___yyaB.1.22522.seq
#    -bsequence dna-align/BSU40980___yyaB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06282___yyaB-BSU40980___yyaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06282___yyaB-BSU40980___yyaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06282___yyaB
# 2: BSU40980___yyaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     437/441 (99.1%)
# Similarity:   437/441 (99.1%)
# Gaps:           0/441 ( 0.0%)
# Score: 2169.0
# 
#
#=======================================

BSNT_06282___      1 ATGGTTTATCAAACGAAGAGAGATGTACCCGTTACGCTGATGATTGTGTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40980___yy      1 ATGGTTTATCAAACGAAGAGAGATGTACCCGTTACGCTGATGATTGTGTT     50

BSNT_06282___     51 TCTCATATTACTGATACAAGCAGATGCCATTGTTCCTTTTGTGCTGGGAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40980___yy     51 TCTCATATTACTGATACAAGCAGATGCCATTGTTCCTTTTGTGCTGGGAA    100

BSNT_06282___    101 ATATGAGAGTTTCCGGCTGGATCATTTTTATTCTGCTGACTCTTTTAAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40980___yy    101 ATATGAGAGTTTCCGGCTGGATCATTTTTATTCTGCTGACTCTTTTAAAT    150

BSNT_06282___    151 GGACTCATCATTTGGAGCTTTATTGACCTAAAATATGTATTGAAGGAACA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40980___yy    151 GGACTCATCATTTGGAGCTTTATTGACCTAAAATATGTATTGAAGGAACA    200

BSNT_06282___    201 CCATCTGATCATTAAAGCCGGATTGATCAAACATCAAATTCCTTATGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40980___yy    201 CCATCTGATCATTAAAGCCGGATTGATCAAACATCAAATTCCTTATGAAA    250

BSNT_06282___    251 AAATCGATAAAGTCGTTCAAAAAAAGAAACTGTGGTCCGGTTTTCGTCTG    300
                     |.|||||||||||||||||||||||||||||.||||||||||||||||||
BSU40980___yy    251 ACATCGATAAAGTCGTTCAAAAAAAGAAACTATGGTCCGGTTTTCGTCTG    300

BSNT_06282___    301 ATCGGCTCTCGCCATGCCATCACGATATATTATAAGGGGGGATGGGGACA    350
                     |||||||||||||||||||||||.|||||||||.||||||||||||||||
BSU40980___yy    301 ATCGGCTCTCGCCATGCCATCACAATATATTATCAGGGGGGATGGGGACA    350

BSNT_06282___    351 TGCAGTAATTTCACCGCAAAAATCTGAAGAATTTATCCACAAGCTCAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40980___yy    351 TGCAGTAATTTCACCGCAAAAATCTGAAGAATTTATCCACAAGCTCAAAG    400

BSNT_06282___    401 AAAAGAATTCTAATATAATAATATTCACTAAAAGTAAGTGA    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU40980___yy    401 AAAAGAATTCTAATATAATAATATTCACTAAAAGTAAGTGA    441


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