Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06280 and BSU40960

See Amino acid alignment / Visit BSNT_06280 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:58
# Commandline: needle
#    -asequence dna-align/BSNT_06280___spo0J.1.22522.seq
#    -bsequence dna-align/BSU40960___parB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06280___spo0J-BSU40960___parB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06280___spo0J-BSU40960___parB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06280___spo0J
# 2: BSU40960___parB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 849
# Identity:     841/849 (99.1%)
# Similarity:   841/849 (99.1%)
# Gaps:           0/849 ( 0.0%)
# Score: 4173.0
# 
#
#=======================================

BSNT_06280___      1 ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa      1 ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGA     50

BSNT_06280___     51 TTTGTCTGAAGAGACAGTTGAAGAAATTAAAATTGCCGATTTACGCCCTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa     51 TTTGTCTGAAGAGACAGTTGAAGAAATTAAAATTGCCGATTTACGCCCTA    100

BSNT_06280___    101 ATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    101 ATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTA    150

BSNT_06280___    151 AAAGAATCTGTGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    151 AAAGAATCTGTGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAA    200

BSNT_06280___    201 ATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGTTTTCGAGCGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    201 ATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGTTTTCGAGCGG    250

BSNT_06280___    251 CAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    251 CAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCA    300

BSNT_06280___    301 GAGGCGTTAATGAGGGAAATTGCTTTATTAGAAAATCTTCAGCGTGAAGA    350
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU40960___pa    301 GAGGCGTTAATGAGGGAAATTGCTTTATTAGAAAACCTTCAGCGTGAAGA    350

BSNT_06280___    351 TTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT    400
                     |||||||||||||||||||||||||||||||||||||.|.||||||||||
BSU40960___pa    351 TTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCCTTTTGAAACACT    400

BSNT_06280___    401 TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    401 TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCG    450

BSNT_06280___    451 CATATTGCGAATCATTTAAGACTGCTGACACTGCCAGAAAATATTCAGCA    500
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU40960___pa    451 CATATTGCGAATCATTTAAGACTGCTGACACTGCCAGAAAATATTCAACA    500

BSNT_06280___    501 GCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTG    550
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU40960___pa    501 GCTTATTGCCGAAGGCACGCTTTCTATGGGACATGGACGCACGCTTCTTG    550

BSNT_06280___    551 GCTTAAAAAACAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    551 GCTTAAAAAACAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCG    600

BSNT_06280___    601 GAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGCAGTTGAATCA    650
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU40960___pa    601 GAGCAGCTCAATGTTCGCCAACTTGAGCAGCTGATTCAGCAGTTGAATCA    650

BSNT_06280___    651 GAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    651 GAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTC    700

BSNT_06280___    701 TAAAAGAGCGAGAATCCTATCTCCAAAATTATTTTGGAACAACAGTTAAT    750
                     |||||||.||.|||||||||||||||||||||||||||||||||||||||
BSU40960___pa    701 TAAAAGAACGGGAATCCTATCTCCAAAATTATTTTGGAACAACAGTTAAT    750

BSNT_06280___    751 ATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    751 ATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA    800

BSNT_06280___    801 TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA    849
                     |||||||||||||||||||||||||||||||||||||||||||||||||
BSU40960___pa    801 TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAACGAGAATCATAA    849


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