Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_06271 and BSU40910

See Amino acid alignment / Visit BSNT_06271 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence dna-align/BSNT_06271___rpsF.1.22522.seq
#    -bsequence dna-align/BSU40910___rpsF.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06271___rpsF-BSU40910___rpsF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06271___rpsF-BSU40910___rpsF.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06271___rpsF
# 2: BSU40910___rpsF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 288
# Identity:     288/288 (100.0%)
# Similarity:   288/288 (100.0%)
# Gaps:           0/288 ( 0.0%)
# Score: 1440.0
# 
#
#=======================================

BSNT_06271___      1 ATGAGAAAGTACGAAGTTATGTACATTATCCGCCCAAACATTGACGAAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40910___rp      1 ATGAGAAAGTACGAAGTTATGTACATTATCCGCCCAAACATTGACGAAGA     50

BSNT_06271___     51 GTCTAAAAAAGCAGTTATCGAGCGTTTCAACAACGTTCTGACTTCTAACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40910___rp     51 GTCTAAAAAAGCAGTTATCGAGCGTTTCAACAACGTTCTGACTTCTAACG    100

BSNT_06271___    101 GTGCGGAGATCACTGGAACAAAGGATTGGGGTAAACGTCGTCTTGCTTAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40910___rp    101 GTGCGGAGATCACTGGAACAAAGGATTGGGGTAAACGTCGTCTTGCTTAC    150

BSNT_06271___    151 GAAATCAACGATTTCCGCGACGGTTTCTACCAAATCGTAAACGTTCAATC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40910___rp    151 GAAATCAACGATTTCCGCGACGGTTTCTACCAAATCGTAAACGTTCAATC    200

BSNT_06271___    201 TGACGCTGCGGCAGTTCAAGAATTTGACCGTCTAGCTAAGATCAGTGACG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40910___rp    201 TGACGCTGCGGCAGTTCAAGAATTTGACCGTCTAGCTAAGATCAGTGACG    250

BSNT_06271___    251 ATATCATTCGCCACATTGTTGTTAAAGAAGAAGAATAA    288
                     ||||||||||||||||||||||||||||||||||||||
BSU40910___rp    251 ATATCATTCGCCACATTGTTGTTAAAGAAGAAGAATAA    288


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.