Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06265 and BSU40870
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_06265.1.22522.seq
# -bsequence dna-align/BSU40870___ccpB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06265-BSU40870___ccpB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06265-BSU40870___ccpB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06265
# 2: BSU40870___ccpB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 937
# Identity: 415/937 (44.3%)
# Similarity: 415/937 (44.3%)
# Gaps: 494/937 (52.7%)
# Score: 1872.0
#
#
#=======================================
BSNT_06265 1 ATGGCAAATATAAAAGAGATCGCAAGACTGGCAAATGTATCTGTTTCGAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40870___cc 1 ATGGCAAATATAAAAGAGATCGCAAGACTGGCAAATGTATCTGTTTCGAC 50
BSNT_06265 51 TGTCTCGCGTGTATTGAATCATCATCCGTATGTGTCTGAAGAAAAGAGAA 100
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU40870___cc 51 TGTCTCGCGTGTATTGAATCATCATCCGTATGTATCTGAAGAAAAGAGAA 100
BSNT_06265 101 AGCTTGTTCAACAAGTCATGAAGGATTTGGATTATACACCAAATCGAACC 150
||||||||||.||||||||||||||.||||||||||||||||||||||||
BSU40870___cc 101 AGCTTGTTCATCAAGTCATGAAGGAATTGGATTATACACCAAATCGAACC 150
BSNT_06265 151 GCAATCGATCTCATTCGCGGGAAAACCCATACGGTCGGTGTGATTCTGCC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40870___cc 151 GCAATCGATCTCATTCGCGGGAAAACCCATACGGTCGGTGTGATTCTGCC 200
BSNT_06265 201 TTATAGCGATCATCCCTGCTTTGATAAAATCGTTAACGGAATCACCAAGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40870___cc 201 TTATAGCGATCATCCCTGCTTTGATAAAATCGTTAACGGAATCACCAAGG 250
BSNT_06265 251 CGGCTTTTCAAAATGAGTATGCAACGACCCTCCTCCCCACCAATTATAAC 300
||||||||||..|||||||||||||||||||.||||||||||||||||||
BSU40870___cc 251 CGGCTTTTCAGCATGAGTATGCAACGACCCTTCTCCCCACCAATTATAAC 300
BSNT_06265 301 CCCGCTATTGAAATCAAATATTTAGAGCTGTTAAGAATGAAGAAAATAGA 350
||||.||||||||||||||||||||||||||||||||.||||||||||||
BSU40870___cc 301 CCCGATATTGAAATCAAATATTTAGAGCTGTTAAGAACGAAGAAAATAGA 350
BSNT_06265 351 CGGTCTTATCATTACATCCCGTGCCCAACTTGGGGAAAGC---------- 390
||||||.||||||||.|||||.|||.|.|.|.||||.|||
BSU40870___cc 351 CGGTCTCATCATTACTTCCCGCGCCAATCATTGGGACAGCATTTTAGCTT 400
BSNT_06265 391 -TCTCGAA------------ATCAC--------ATAAAGCAGACTTTCAT 419
||..||| |||.| |||..|.||||.||.||
BSU40870___cc 401 ATCAGGAATATGGGCCGGTCATCGCTTGTGAGGATACCGGAGACATTGAT 450
BSNT_06265 420 GAAGCATTGT----------ACAG-----CTGCTTA--CTGA-------- 444
| ..|.|||| |||| ||||||| |.||
BSU40870___cc 451 G-TCCCTTGTGCTTTTAATGACAGAAAAACTGCTTATGCAGAGAGCTTTC 499
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 500 GCTATTTAAAGAGCCGCGGGCATGAGAATATTGCTTTTACGTGTGTCAGA 549
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 550 GAAGCTGATAGGAGCCCGAGCACGGCTGATAAAGCTGCGGCCTATAAAGC 599
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 600 TGTCTGCGGAAGGTTGGAAGACCGCCATATGCTGTCCGGATGCAACGATA 649
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 650 TGAATGATGGTGAGCTGGCAGCTGAACATTTTTATATGAGCGGGCGGGTT 699
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 700 CCGACTGCTATTTATGCAAATAGTGATGAAGTGGCAGCTGGAATTCATCT 749
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 750 ATTTGCCAAAAAGAATAATTGGGATGTTGAAATCATAGGCGAGGGAAATA 799
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 800 CTTCTATCAGCCGTGTTCTTGGTTTTCCGTCGCTTGATTTGAATCTTGAG 849
BSNT_06265 444 -------------------------------------------------- 444
BSU40870___cc 850 CAGCTCGGCATCGCAGCATTTTCTCTATTTTTGCAGGATGAACCCGCTGA 899
BSNT_06265 444 ------------------------------------- 444
BSU40870___cc 900 TATCAAAATTCAGCATAAATTTAAGAAAAAAGCTTGA 936
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