Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06260 and BSU40860

See Amino acid alignment / Visit BSNT_06260 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:56
# Commandline: needle
#    -asequence dna-align/BSNT_06260___yyaH.1.22522.seq
#    -bsequence dna-align/BSU40860___yyaH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06260___yyaH-BSU40860___yyaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06260___yyaH-BSU40860___yyaH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06260___yyaH
# 2: BSU40860___yyaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity:     345/385 (89.6%)
# Similarity:   345/385 (89.6%)
# Gaps:          11/385 ( 2.9%)
# Score: 1597.5
# 
#
#=======================================

BSNT_06260___      1 -------TTGAATATACATACAGCGATCTGGGTCAAAGATTTAGAGCGAA     43
                            ||||    ||||||||||.||||||||||.|||||||||||||
BSU40860___yy      1 ATGCAGATTGA----ACATACAGCGGTCTGGGTCAATGATTTAGAGCGAA     46

BSNT_06260___     44 TGAAGGCTTTTTACGAAACGTATTTTAACGGCAAAGCGAATGATTTGTAC     93
                     |||||.|||||||.|||.||||||||||.|||.||||||||||||||||.
BSU40860___yy     47 TGAAGTCTTTTTATGAATCGTATTTTAATGGCGAAGCGAATGATTTGTAT     96

BSNT_06260___     94 CATAATGAGAAAAAAGATTTTAAGTCTTATTTTATTACGTTTGATTCCGG    143
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40860___yy     97 CATAATGAGAAAAAAGATTTTAAGTCTTATTTTATTACGTTTGATTCCGG    146

BSNT_06260___    144 AGGAAGGCTGGAAATGATGAAAAAAGGAAATGTGACTGATCCGCCTTCAC    193
                     ||.||||||||||||.|||||||||||.||||||||.||||||||.||||
BSU40860___yy    147 AGCAAGGCTGGAAATTATGAAAAAAGGGAATGTGACCGATCCGCCCTCAC    196

BSNT_06260___    194 CAACGATGACAGGCTGGGCCCATATTGCCTTTTCTGTTGGAAGCCGGAAG    243
                     .|||.||||||||||||||.||||||||||||||.|||||.||||||.||
BSU40860___yy    197 AAACAATGACAGGCTGGGCACATATTGCCTTTTCCGTTGGGAGCCGGGAG    246

BSNT_06260___    244 AAGGTTGATGAACTGACTGATCGATTGAAGAAGGATGGTTTCGCAGTAGT    293
                     ||.|||||.|||||||||||||||||||||..||||||||||||||||||
BSU40860___yy    247 AAAGTTGACGAACTGACTGATCGATTGAAGGCGGATGGTTTCGCAGTAGT    296

BSNT_06260___    294 AAACGGCCCAAGGACAACTGGAGATGGCTACTATGAAAGTGTGCTTGAAG    343
                     |||||||||.||||||||.|||||.||||||||||||||.|||.||||.|
BSU40860___yy    297 AAACGGCCCGAGGACAACAGGAGACGGCTACTATGAAAGCGTGATTGAGG    346

BSNT_06260___    344 ATGATGAAGGAAATTTGATCGAGATTACAATCTGA    378
                     |||||||||||||||||||||||||||||||||||
BSU40860___yy    347 ATGATGAAGGAAATTTGATCGAGATTACAATCTGA    381


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