Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06260 and BSU40860
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_06260___yyaH.1.22522.seq
# -bsequence dna-align/BSU40860___yyaH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06260___yyaH-BSU40860___yyaH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06260___yyaH-BSU40860___yyaH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06260___yyaH
# 2: BSU40860___yyaH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 385
# Identity: 345/385 (89.6%)
# Similarity: 345/385 (89.6%)
# Gaps: 11/385 ( 2.9%)
# Score: 1597.5
#
#
#=======================================
BSNT_06260___ 1 -------TTGAATATACATACAGCGATCTGGGTCAAAGATTTAGAGCGAA 43
|||| ||||||||||.||||||||||.|||||||||||||
BSU40860___yy 1 ATGCAGATTGA----ACATACAGCGGTCTGGGTCAATGATTTAGAGCGAA 46
BSNT_06260___ 44 TGAAGGCTTTTTACGAAACGTATTTTAACGGCAAAGCGAATGATTTGTAC 93
|||||.|||||||.|||.||||||||||.|||.||||||||||||||||.
BSU40860___yy 47 TGAAGTCTTTTTATGAATCGTATTTTAATGGCGAAGCGAATGATTTGTAT 96
BSNT_06260___ 94 CATAATGAGAAAAAAGATTTTAAGTCTTATTTTATTACGTTTGATTCCGG 143
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40860___yy 97 CATAATGAGAAAAAAGATTTTAAGTCTTATTTTATTACGTTTGATTCCGG 146
BSNT_06260___ 144 AGGAAGGCTGGAAATGATGAAAAAAGGAAATGTGACTGATCCGCCTTCAC 193
||.||||||||||||.|||||||||||.||||||||.||||||||.||||
BSU40860___yy 147 AGCAAGGCTGGAAATTATGAAAAAAGGGAATGTGACCGATCCGCCCTCAC 196
BSNT_06260___ 194 CAACGATGACAGGCTGGGCCCATATTGCCTTTTCTGTTGGAAGCCGGAAG 243
.|||.||||||||||||||.||||||||||||||.|||||.||||||.||
BSU40860___yy 197 AAACAATGACAGGCTGGGCACATATTGCCTTTTCCGTTGGGAGCCGGGAG 246
BSNT_06260___ 244 AAGGTTGATGAACTGACTGATCGATTGAAGAAGGATGGTTTCGCAGTAGT 293
||.|||||.|||||||||||||||||||||..||||||||||||||||||
BSU40860___yy 247 AAAGTTGACGAACTGACTGATCGATTGAAGGCGGATGGTTTCGCAGTAGT 296
BSNT_06260___ 294 AAACGGCCCAAGGACAACTGGAGATGGCTACTATGAAAGTGTGCTTGAAG 343
|||||||||.||||||||.|||||.||||||||||||||.|||.||||.|
BSU40860___yy 297 AAACGGCCCGAGGACAACAGGAGACGGCTACTATGAAAGCGTGATTGAGG 346
BSNT_06260___ 344 ATGATGAAGGAAATTTGATCGAGATTACAATCTGA 378
|||||||||||||||||||||||||||||||||||
BSU40860___yy 347 ATGATGAAGGAAATTTGATCGAGATTACAATCTGA 381
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