Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06259 and BSU40840
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_06259___yyaJ.1.22522.seq
# -bsequence dna-align/BSU40840___yyaJ.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06259___yyaJ-BSU40840___yyaJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06259___yyaJ-BSU40840___yyaJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06259___yyaJ
# 2: BSU40840___yyaJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1356
# Identity: 1334/1356 (98.4%)
# Similarity: 1334/1356 (98.4%)
# Gaps: 0/1356 ( 0.0%)
# Score: 6582.0
#
#
#=======================================
BSNT_06259___ 1 ATGAATACGATCTTCAAACAAAAGAATACACATCCTTTCTCAAACGCAGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1 ATGAATACGATCTTCAAACAAAAGAATACACATCCTTTCTCAAACGCAGC 50
BSNT_06259___ 51 GAATCGTTTAGACCGCCTTCCGATTTCACGCGTTCATTTCCAAGTGTTAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 51 GAATCGTTTAGACCGCCTTCCGATTTCACGCGTTCATTTCCAAGTGTTAA 100
BSNT_06259___ 101 CCGCTCTCGGCATTGTTTATTTCTTTGATCTCGCAGATTTATTTACCCTC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 101 CCGCTCTCGGCATTGTTTATTTCTTTGATCTCGCAGATTTATTTACCCTC 150
BSNT_06259___ 151 AGCAATGTAGCGCCGGCACTGATTGAACATTGGGGCATCCCGCTTTCAAC 200
|||||.|||||||||||||||||.||.|||||||||||||||||||||||
BSU40840___yy 151 AGCAACGTAGCGCCGGCACTGATCGAGCATTGGGGCATCCCGCTTTCAAC 200
BSNT_06259___ 201 TATTGCTAACGTAACGGCTGCTTCGTTTTTAGGCATGTTTTTAGGCGCTT 250
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU40840___yy 201 TATTGCTAACGTAACGGCCGCTTCGTTTTTAGGCATGTTTTTAGGCGCTT 250
BSNT_06259___ 251 CACTGGGCGGACGGCTGTCCGATCGAATCGGCCGCAAAAAAGCCTTAAAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 251 CACTGGGCGGACGGCTGTCCGATCGAATCGGCCGCAAAAAAGCCTTAAAT 300
BSNT_06259___ 301 CTATTTGTCTTTGTTTTCTCAATCGCATCGCTATGCAATGCTGCGGCATG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 301 CTATTTGTCTTTGTTTTCTCAATCGCATCGCTATGCAATGCTGCGGCATG 350
BSNT_06259___ 351 GGACATTCCATCTTTAATGACATTCCGTTTTCTCACCGGATTTGGCGTTG 400
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU40840___yy 351 GGACATTCCATCTTTAATGACATTCCGTTTCCTCACCGGATTTGGCGTTG 400
BSNT_06259___ 401 CAGCCGCCATGGTCATTACGAATAGCTATTTGGCGGAATTTTTCCCTTCA 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 401 CAGCCGCCATGGTCATTACGAATAGCTATTTGGCGGAATTTTTCCCTTCA 450
BSNT_06259___ 451 AGTGTACGTGGAAAATATATTTCTTTTTGTGCCATGATTGGATTGATCGG 500
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU40840___yy 451 AGTGTACGTGGAAAATATATTTCTTTTTGTGCCATGATTGGATTGATTGG 500
BSNT_06259___ 501 GGTGCCGATCACCAACATTGTGTCTGCCTTTGTCATTCCTCTTGGTTCAT 550
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 501 GGTTCCGATCACCAACATTGTGTCTGCCTTTGTCATTCCTCTTGGTTCAT 550
BSNT_06259___ 551 GGGGATGGAGGCTAGTATTTGTATGGGGTGCCGTCGGCCTTATTTATTTT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 551 GGGGATGGAGGCTAGTATTTGTATGGGGTGCCGTCGGCCTTATTTATTTT 600
BSNT_06259___ 601 TTCTTTATTCGACGGCTGGAAGAGTCGCCTCGCTGGCACGAAAATCGCGG 650
|||||.||.|..||.|||||||||||.|||||||||||||||||||||||
BSU40840___yy 601 TTCTTCATCCACCGTCTGGAAGAGTCACCTCGCTGGCACGAAAATCGCGG 650
BSNT_06259___ 651 GGAATATGCGAAAGCCGATGCGATCCTCAACCGAATTGAGGCACAGGTTG 700
|||||||||||||||||||||||||||||.|||||||||.|.||||||||
BSU40840___yy 651 GGAATATGCGAAAGCCGATGCGATCCTCACCCGAATTGAAGAACAGGTTG 700
BSNT_06259___ 701 AAAAGGAGAAAGGCCCGCTTCCGGCAGCATCCCAGCCTAAAGTAAGCGAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 701 AAAAGGAGAAAGGCCCGCTTCCGGCAGCATCCCAGCCTAAAGTAAGCGAA 750
BSNT_06259___ 751 ACTGTTAAGCAGCATGCAGGTTACGCCGGCTTATTGAAAGGCAGAAACCT 800
||||||||||||.|||||||||||||.|||||||||||||||||||||||
BSU40840___yy 751 ACTGTTAAGCAGAATGCAGGTTACGCAGGCTTATTGAAAGGCAGAAACCT 800
BSNT_06259___ 801 CAAAATCACCATCGTATTATCAGCTGTATGGATTTTTGAAACGTTTGGGT 850
||||||.||||||||||||||.||||||||||||||||||||||||||||
BSU40840___yy 801 CAAAATTACCATCGTATTATCTGCTGTATGGATTTTTGAAACGTTTGGGT 850
BSNT_06259___ 851 TTTACGGATTTGCTTCATGGGTTCCAAGCCTGCTAAAAAGCAATGGCGTA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 851 TTTACGGATTTGCTTCATGGGTTCCAAGCCTGCTAAAAAGCAATGGCGTA 900
BSNT_06259___ 901 ACCATGGAAAATACATTATGGTATAACGTATTGCATTCCGTCGGCGCTCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 901 ACCATGGAAAATACATTATGGTATAACGTATTGCATTCCGTCGGCGCTCC 950
BSNT_06259___ 951 ACTTGGCGCACTGCTCGGCTCCATGATTTCCGAAAGATTTCAAAGAAAAT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 951 ACTTGGCGCACTGCTCGGCTCCATGATTTCCGAAAGATTTCAAAGAAAAT 1000
BSNT_06259___ 1001 GGATTTTAGCTGCGAGTGCGTTTCTGACGGCCATCGCCGGGCTCTTATAT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1001 GGATTTTAGCTGCGAGTGCGTTTCTGACGGCCATCGCCGGGCTCTTATAT 1050
BSNT_06259___ 1051 GGTATGACTTTTATTCCCATCATGATCATTGTATTTGGTTTTATCGTGAA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1051 GGTATGACTTTTATTCCCATCATGATCATTGTATTTGGTTTTATCGTGAA 1100
BSNT_06259___ 1101 TATCACAGAACGGGTCTTTACCTCGAACTTATACGCCTATACATCTGAAC 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1101 TATCACAGAACGGGTCTTTACCTCGAACTTATACGCCTATACATCTGAAC 1150
BSNT_06259___ 1151 CTTATCCGACTGAATACCGCTCGTCTGGCAGCGGTTTAGCCTATGGTCTT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1151 CTTATCCGACTGAATACCGCTCGTCTGGCAGCGGTTTAGCCTATGGTCTT 1200
BSNT_06259___ 1201 GGCCGTTTTTCAAACATTTTTGGCTCATTGCTTGTCGGATTTATTGCCGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1201 GGCCGTTTTTCAAACATTTTTGGCTCATTGCTTGTCGGATTTATTGCCGT 1250
BSNT_06259___ 1251 TCAGCTCGGCTATATCAGCGTCTTCTTATTTATTGGGGGCTGCTGGCTCG 1300
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU40840___yy 1251 TCAGCTCGGCTATATCAGCGTCTTCTTATTTATTGGGGGCTGTTGGCTCG 1300
BSNT_06259___ 1301 CTTGCTCCTTGCTGTTAATCTTCTTCGGTCCTAATACGAATGCAAAACAG 1350
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU40840___yy 1301 CATGCTCCTTGCTGTTAATCTTCTTCGGTCCTAATACGAATGCAAAACAG 1350
BSNT_06259___ 1351 ATTTAA 1356
||||||
BSU40840___yy 1351 ATTTAA 1356
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