Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06258 and BSU40830
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:56
# Commandline: needle
# -asequence dna-align/BSNT_06258___yyaK.1.22522.seq
# -bsequence dna-align/BSU40830___yyaK.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06258___yyaK-BSU40830___yyaK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06258___yyaK-BSU40830___yyaK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06258___yyaK
# 2: BSU40830___yyaK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 924
# Identity: 882/924 (95.5%)
# Similarity: 882/924 (95.5%)
# Gaps: 24/924 ( 2.6%)
# Score: 4338.0
#
#
#=======================================
BSNT_06258___ 1 TTGAAAGGAAGAGACATAGAAGGAATGAATTCATTTATCCGTCCTATAGA 50
||||||||||||||||||||||||||
BSU40830___yy 1 ------------------------ATGAATTCATTTATCCGTCCTATAGA 26
BSNT_06258___ 51 AGGAAACAATACGTTGTGGAGATATTTTTTCGCTTTTTTGGTGATGGTAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 27 AGGAAACAATACGTTGTGGAGATATTTTTTCGCTTTTTTGGTGATGGTAG 76
BSNT_06258___ 101 GGTTATATGTATTCGGGAATATAGCTTACCTTTTCGCTATACTGTTCACG 150
|||||||||||||.|||||||||||||||||||||||||||.||||||||
BSU40830___yy 77 GGTTATATGTATTAGGGAATATAGCTTACCTTTTCGCTATATTGTTCACG 126
BSNT_06258___ 151 GTTATTGTGAATCCCAATATCACGTTTGATTTGGATGAAGCTGTGCTGAG 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 127 GTTATTGTGAATCCCAATATCACGTTTGATTTGGATGAAGCTGTGCTGAG 176
BSNT_06258___ 201 TGATCCTCTCGTAGATCTTTATTTGTCCCATGTGATTTATTTATTCGCCA 250
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 177 TGATCCCCTCGTAGATCTTTATTTGTCCCATGTGATTTATTTATTCGCCA 226
BSNT_06258___ 251 TTCCGGGAGTTTGGCTGGCTGTGCGCTTTATTTTGAAGCGGCCTTTCCGA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 227 TTCCGGGAGTTTGGCTGGCTGTGCGCTTTATTTTGAAGCGGCCTTTCCGA 276
BSNT_06258___ 301 ACTGTGATTACACCAAATTCAAAGATGAATTGGCGGAGAATTTCCTTTGG 350
||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 277 ACGGTGATAACACCAAATTCAAAGATGAATTGGCGGAGAATTTCCTTTGG 326
BSNT_06258___ 351 TTTTATTGCTTATTTCTTGCTGATGATCGCCGTACAATTGATTGATTTTG 400
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU40830___yy 327 TTTTATTGCTTATTTCTTGCTAATGATCGCCGTACAATTGATTGATTTTG 376
BSNT_06258___ 401 CGATTCATCCTGATAGCTATTCAATGCAGGAGTTTAATGCCTCACGCTTT 450
.|||||||||||||||||||||||||||.|||||||||||.|||||.|||
BSU40830___yy 377 TGATTCATCCTGATAGCTATTCAATGCAAGAGTTTAATGCATCACGATTT 426
BSNT_06258___ 451 ATCTGGCTGCTAGCGGCTGCCCTCATTTTGGTTCCGATTCAGACATCAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 427 ATCTGGCTGCTAGCGGCTGCCCTCATTTTGGTTCCGATTCAGACATCAGC 476
BSNT_06258___ 501 TGAGGAACTGTTTTTCAGGGGATTTTTGCTTCAAGCTTTCGGGAGATTGA 550
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 477 TGAGGAACTATTTTTCAGGGGATTTTTGCTTCAAGCTTTCGGGAGATTGA 526
BSNT_06258___ 551 CGAAAAATCCTCTATTTTTGACACTGATTGTCGGAGGATTGTTTGGCGTA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 527 CGAAAAATCCTCTATTTTTGACACTGATTGTCGGAGGATTGTTTGGCGTA 576
BSNT_06258___ 601 TTGCATTTTGCGAATCCAGAAATGAACAATGGCGCTGTCTGGGCAGGAAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 577 TTGCATTTTGCGAATCCAGAAATGAACAATGGCGCTGTCTGGGCAGGAAT 626
BSNT_06258___ 651 TGAGTATTTAACATTTGGTTTTGTGTGGACCTATTACACGATTAAAACTG 700
||||||.|||||||||||.|||||||||||.|||||||||||||||||||
BSU40830___yy 627 TGAGTACTTAACATTTGGGTTTGTGTGGACGTATTACACGATTAAAACTG 676
BSNT_06258___ 701 GAAGCATCGAAATATCACTTGGCGCCCATGCCGCGAATAATATGTTTTTG 750
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 677 GGAGCATCGAAATATCACTTGGCGCCCATGCCGCGAATAATATGTTTTTG 726
BSNT_06258___ 751 TGTATGTTTATTACAGAAAAAAACAGTGTGTATGGAGGAATTCCTTCTCT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 727 TGTATGTTTATTACAGAAAAAAACAGTGTGTATGGAGGAATTCCTTCTCT 776
BSNT_06258___ 801 CTTTACGGTTACGCGGGGGAACCCGATGTGGGAGGCTTTCTTTACGATAG 850
.|||||.|||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 777 GTTTACCGTTACGCGGGGGAACCCGATGTGGGAGGCTTTCTTTACGATAG 826
BSNT_06258___ 851 CGGTCAATCTTGTGTTTGCGGGGATCGCTTTATGGTACCATAAGAAATCA 900
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40830___yy 827 CGGTCAACCTTGTGTTTGCGGGGATCGCTTTATGGTACCATAAGAAATCA 876
BSNT_06258___ 901 AAAAGTAAGCAGCAAGGGTCTTAA 924
||||||||||||||||||||||||
BSU40830___yy 877 AAAAGTAAGCAGCAAGGGTCTTAA 900
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