Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06253 and BSU40790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_06253.1.22522.seq
# -bsequence dna-align/BSU40790___yyaO.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06253-BSU40790___yyaO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06253-BSU40790___yyaO.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06253
# 2: BSU40790___yyaO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 240
# Identity: 165/240 (68.8%)
# Similarity: 165/240 (68.8%)
# Gaps: 54/240 (22.5%)
# Score: 709.5
#
#
#=======================================
BSNT_06253 1 ATGCCCACTAACAATAAGCCCAATAGATTAATCGCTGAGAAGTCTCCTTA 50
|||||.|.|||.|.|||.||||||||||||||||||||.|||||||||||
BSU40790___yy 1 ATGCCAAATAAAAGTAAACCCAATAGATTAATCGCTGAAAAGTCTCCTTA 50
BSNT_06253 51 TTTACTTCAACATGCTCATAACCCTGTGAATTGGTTCCCTTGGGGAGATG 100
||||||.|||||.||.||.|||||||||.|.||||||||.||||||||.|
BSU40790___yy 51 TTTACTCCAACACGCCCACAACCCTGTGGACTGGTTCCCGTGGGGAGAAG 100
BSNT_06253 101 AAGCATTTGAAAAAGCGAAACGCGAAAACAAGCCTGTTCTGGTCAGCATC 150
|||||||||.||||||.|||||||||||||||||.|||||||||||||||
BSU40790___yy 101 AAGCATTTGCAAAAGCAAAACGCGAAAACAAGCCGGTTCTGGTCAGCATC 150
BSNT_06253 151 GGTTATT---CGACTTGTCATTGGTGCCATG------------------- 178
||||||| ||||||||||||||||.|.||
BSU40790___yy 151 GGTTATTCGACGACTTGTCATTGGTGGCCTGGGATAATCAAATCGTGTGG 200
BSNT_06253 179 ---TCTCTTAA----------------------------- 186
||..||||
BSU40790___yy 201 AACTCCATTAAAAGATAACAGAAGCCATTTTAAACGATAA 240
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