Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06252 and BSU40760

See Amino acid alignment / Visit BSNT_06252 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:55
# Commandline: needle
#    -asequence dna-align/BSNT_06252___yyaP.1.22522.seq
#    -bsequence dna-align/BSU40760___yyaP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06252___yyaP-BSU40760___yyaP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06252___yyaP-BSU40760___yyaP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06252___yyaP
# 2: BSU40760___yyaP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 567
# Identity:     557/567 (98.2%)
# Similarity:   557/567 (98.2%)
# Gaps:           0/567 ( 0.0%)
# Score: 2745.0
# 
#
#=======================================

BSNT_06252___      1 ATGACAAATAACTTAAAACAGAGAAGAATCATTTTAGATTTAGCAGTTAC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy      1 ATGACAAATAACTTAAAACAGAGAAGAATCATTTTAGATTTAGCAGTTAC     50

BSNT_06252___     51 TTTAGATGGTTTTATTGAAGGGAAAAATGGAGAAGTTGATTGGTGCATTA    100
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU40760___yy     51 TTTAGATGGTTTTATTGAAGGGAAAAATGGAGAAGTTGATTGGTGTATTA    100

BSNT_06252___    101 TGGACCCTGATATGGGGTTTACTGATTTCTTAAATCAAATTGATACTATT    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40760___yy    101 TGGACCCTGATATGGGGTTTACTGATTTTTTAAATCAAATTGATACTATT    150

BSNT_06252___    151 TTATATAGCAGAAAAAGCTACGATTTATGGGGACAATATATTCCAAAAGA    200
                     ||||||.|.||||||||||.||||||||||||||||||.|||||||||.|
BSU40760___yy    151 TTATATGGTAGAAAAAGCTTCGATTTATGGGGACAATACATTCCAAAAAA    200

BSNT_06252___    201 TGAAGACCCTGATACAGAAAAGGAACTTTGGAAATTGGTTCATAGTAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy    201 TGAAGACCCTGATACAGAAAAGGAACTTTGGAAATTGGTTCATAGTAAAA    250

BSNT_06252___    251 AGAAATATGTTTTTTCCAGAACACAAAATGAGATTGATAATCAAGCCATA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy    251 AGAAATATGTTTTTTCCAGAACACAAAATGAGATTGATAATCAAGCCATA    300

BSNT_06252___    301 TTTATAAATGATAATATTCTTGAAGAAGTAAATAAATTGAAGAAAAAGTC    350
                     |||||||||||||||||||||||||||||||||||||||||||||||..|
BSU40760___yy    301 TTTATAAATGATAATATTCTTGAAGAAGTAAATAAATTGAAGAAAAATCC    350

BSNT_06252___    351 TGGCAAAGACATCTGGCTATATGGTGGAGCGAGTCTCATTACAACTTTTA    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy    351 TGGTAAAGACATCTGGCTATATGGTGGAGCGAGTCTCATTACAACTTTTA    400

BSNT_06252___    401 TAAATTTGGGGCTTGTTGATGAATTTAGATTATCTATTCACCCTGTTGTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy    401 TAAATTTGGGGCTTGTTGATGAATTTAGATTATCTATTCACCCTGTTGTT    450

BSNT_06252___    451 TTGGGAGAAGGAAAACCGTTGTTTATTGATGTAAAACAGAGGATAAATTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy    451 TTGGGAGAAGGAAAACCGTTGTTTATTGATGTAAAACAGAGGATAAATTT    500

BSNT_06252___    501 AAAAATGGTGAATACAAGAACATTTTCCTCTGGCGTTGTGCAAATCGTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40760___yy    501 AAAAATGGTGAATACAAGAACATTTTCCTCTGGCGTTGTGCAAATCGTTT    550

BSNT_06252___    551 ATCATTGGAATGGCTAA    567
                     |||||||||||||||||
BSU40760___yy    551 ATCATTGGAATGGCTAA    567


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