Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06249 and BSU40740

See Amino acid alignment / Visit BSNT_06249 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:55
# Commandline: needle
#    -asequence dna-align/BSNT_06249___yyaR.1.22522.seq
#    -bsequence dna-align/BSU40740___yyaR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06249___yyaR-BSU40740___yyaR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06249___yyaR-BSU40740___yyaR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06249___yyaR
# 2: BSU40740___yyaR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity:     496/522 (95.0%)
# Similarity:   496/522 (95.0%)
# Gaps:           0/522 ( 0.0%)
# Score: 2376.0
# 
#
#=======================================

BSNT_06249___      1 ATGATCAAGAAAATGACTCAAATGAATTTGAAAGATTTCAATAAACCAAA     50
                     |||||||.||||||||||||..|||||.||||||||||||||||||||||
BSU40740___yy      1 ATGATCATGAAAATGACTCATTTGAATATGAAAGATTTCAATAAACCAAA     50

BSNT_06249___     51 CGAACCTTTCGTTGTTTTTGGGAGAATGATACCTACTTTTGAAAACGGTG    100
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU40740___yy     51 CGAACCTTTCGTTGTTTTTGGGAGAATGATACCTGCTTTTGAAAACGGTG    100

BSNT_06249___    101 TTTGGACATATACTGAGGAACGATTTTCTAAACCTTATTTTAAACAATAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40740___yy    101 TTTGGACATATACTGAGGAACGATTTTCTAAACCTTATTTTAAACAATAT    150

BSNT_06249___    151 GAAGATGATGAAATGGATGTTAGTTATATTGAAGATGAAGGGAAGGTTGT    200
                     |||||||||||.|||||||||||||||.|||||||.||.|||||.|..|.
BSU40740___yy    151 GAAGATGATGACATGGATGTTAGTTATGTTGAAGAAGAGGGGAAAGCGGC    200

BSNT_06249___    201 CTTTTTATATTATGTTGAAAACAACTGCATCGGCCGGATTAAGATTCGTT    250
                     .||||||||||||.||||||||||||||||.||||||||||||||.||||
BSU40740___yy    201 TTTTTTATATTATCTTGAAAACAACTGCATTGGCCGGATTAAGATCCGTT    250

BSNT_06249___    251 CTAACTGGAATGGGTATGCACTAATAGAGGACATTGCCGTTGCAAAAGAC    300
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU40740___yy    251 CTAACTGGAATGGGTATGCACTAATAGAGGACATTGCCGTGGCAAAAGAC    300

BSNT_06249___    301 TATAGACAAAAAGGCGTTGGAACAGCATTATTACATAAAGCGATTGAGTG    350
                     ||||||.|||||||.|||||||||||||||||||||||||||||||||||
BSU40740___yy    301 TATAGAAAAAAAGGTGTTGGAACAGCATTATTACATAAAGCGATTGAGTG    350

BSNT_06249___    351 GGCAAAGGAGAATCGTTTTTGTGGTCTTATGCTTGAAACACAAGATATTA    400
                     ||||||||||||||.||||||||||||||||||||||||.||||||||||
BSU40740___yy    351 GGCAAAGGAGAATCATTTTTGTGGTCTTATGCTTGAAACCCAAGATATTA    400

BSNT_06249___    401 ATGTTTCAGCTTGTCGTTTTTATGCCAAACATCACTTTATAATAGGTGCA    450
                     ||.||||||||||||.|||||||||||||||||||||||||||||||||.
BSU40740___yy    401 ATATTTCAGCTTGTCATTTTTATGCCAAACATCACTTTATAATAGGTGCG    450

BSNT_06249___    451 GTTGATACGATGCTTTATTCCAACCTTCCAACAGCAAATGAAATTGCGAT    500
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU40740___yy    451 GTTGATACGATGCTTTATTCCAACTTTCCAACAGCAAATGAAATTGCGAT    500

BSNT_06249___    501 TTTTTGGTACTATAAATTTTAA    522
                     ||||||||||||||||||||||
BSU40740___yy    501 TTTTTGGTACTATAAATTTTAA    522


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